| Id Trinity | FTRINITY_DN55263_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_137997 |
| Sequence | CGGCACAACGCCATTTCCATCGCACACATTTTCTGTCTCTATATATATAAATCCCTTCTTACCCTTCCATTTCTCTTACAAAAATATTGTCATTCTTTCG TTTTCTCGGGATCCGCGATATACCGCGCGATCTCGGGATTTCTATTGAATCCATTCCAATTCCATCACTGGTTTTGGTTTGGTTTTAAAATAAATAAATT AAAATGAGCGATCATTTGGTTCTGTATGTGGACCGGCTTGTACGGCCGATCCCGGTTGAGCCGATGAGTCAAGACCCGGTTCAGCCATCTCCTGAACCTT CGGTGCTAGTGGATGCTGCGGCCGTTGCAGGCCCCTCCGATTCTTCTTTGATGGAAAGCGACGGTGAGGGTGAGGGTGAGGATGAGGAAGAGCGGCTGTT GCAGATGGCGGAGTGTCGCATTTGTCAGGAGGAGGACAGTGTTAGCAATCTAGAATCTCCCTGCACTTGCAGAGGCAGCCTTAAGTATGCTCACAGAAAG TGCGTCCAGCATTGGTGCAACGAGAAGGGTGACATAACTTGTGAGATATGTCATAAGCCCTATCAACCTGGTTATACTGCCCCACCACCTTGTCCACGTC CTGAAGAAACTACCATTGATATTGGGTAAGCTGGATTTTCTATTCAAAGTCTTTATTCAAGTAAGTTGTATCACTTCTATGTGTGTATGAGCATTCTTTC TATTTCAAACTCTTAAGGAATATTAGTTTGAAACTCTTGTCTGCCTCATAAATTATGACCATATTTGCAGTGGAGGTTGGAGAATCTCTGGCACACCTTT GGACTTGCATGATCCTCGACTCTTGGCAATTGCAGAGGCAGAACGCCAATTCTTGGAAGCCGAATATGATGGATATGCTGCGTCTAATGCCAGTGGAGCT GCATTTTTCCGTTCAGCTGCTCTAATTGTAAGGCAGCAATCTTGAAGTCTTCTTCAACAAATTATTTGTGGAATTAGTCATATATATGAGCAGAGGACAT AATTTTTCTTGAGGTCATGCATAGTGTTGGGCAATTGATATATCTACAAAACTATCAACTTTTATGGACATTTATATTTCTTAATTATTTGGAATTTTAA AGAAAACAATTCACTTGCTCGGATCTTTACATTATTGATGAACATGCACCTCCGCATTTGTTCACTATTGTTTATGTCATCTATGCAAATCCAATACTTT CACATGATTTAAGCTAACTCCATCAGTCCATTGTACTCGTTGCAGTTAATGGCACTTTTACTCTTGAGGCATGCACTTTTTGTCACGGATGCTGATGTTG ATGCTGAAGATGATCCATCCACTTTTTTCTCTGTATGTGATTTGAGTTCCTTTTGGCTAAATATATGGTTGCTGTTGTATTGCTTTCAAATGCACTGCCG AGCAAACCTAATTAACTCACCATTTTCTGCAGCTTTTCTTGCTTCGAGCAGCTGGTTTTCTTTTTCCTTGCTATATCATGGCTTGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49932; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137997
| Blastp | ERAD-associated E3 ubiquitin-protein ligase DOA10 from Saccharomyces with 43.55% of identity |
|---|---|
| Blastx | ERAD-associated E3 ubiquitin-protein ligase DOA10 from Saccharomyces with 43.55% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YIL030C) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017422663.1) |
| Pfam | RING-variant domain (PF12906.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |