| Id Trinity | FTRINITY_DN55263_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_137999 |
| Sequence | CTCTTCCGTTTATCTCTCTTTATCTAAATACTTTTTCTATTTTCCCTCTTACAAATATTAGTATATTACCCATTACTCCGGTAACTCAGATTCTTCCGTT TTCTCGGGATCCGCGATTTACCGCGTGATCTCGAGATTTTTTATTTTCGAATCCATTCCAATTCAATTCCCCCTTTTAATTTCAATTTCATTTTGCTGAC ATTTTTTTTTCTGATTTTTTTCTTAGGGGTGTTGCTTTGGATTGGTTTTAAAAAAATAATAAAATGAGTGATCGTTTGGTGCTGTATGTGGACCGGTTGG TACGGCCGGTGCCGGTTGAGCCGTTGACTCAACACCCGGCTCAGCCCTCTCCTGAGCCTTCGCCGTCAGTGGATGCTGTCGCCGTGGACAGCGACGGCGA GGCTGAGGAGCATCCGCTGTTGCAGATGGCGGAGTGTCGCATTTGTCAGGAAGAGGACAGCGTTAACAATCTAGAGTCACCATGCGGATGCAGCGGCAGC CTTAAGTATGCTCACAGAAAGTGCGTCCAGCATTGGTGCAACGAGAAGGGTGACATAACTTGTGAGATATGTCATAAGGTATGCTTCTTCTATGCAAAAC TTCCATATTTCATAGTTTTATTGTTAAGTTGTGGGGATTGGTTGATAATGGTCATGCTTACCCTTACAAGTATACCTTTACAAAAAAATAATTTTGTACA ATGATATCTTCAATTCCGAGGTATATGATGTAGCATTGGTATCACACAACTGAATATGAGATTAGAGTCCTCGGCATGCATGATGAATGGCTAGGACTGA GATTCCCACAATGTCATAGTAGGGGCATTGCATGTCTGCCTTGTTGCTAGGATTGGGTCATTGGGATAGGATGGAATATGGGATGCTAGCTAAAATATCC TACATATTAAGGAGTTTTAGATGCCTTTTATAAGGATGAAATGTGTGTAACGAATCCTTAAATTACTGTGAATCTTAGAATTGGAGAAACTGAAGGTAAC AGGCTAGTATAAGTCATATGCACAATAATATGTAAAACATGCTTTTAAGAAGTTTAATATTTTGCGTTGTTTGATGTGGTAGTCTATTCGATGTTGTTTG TGTCTTTTTGACCTCTTGGGTTGTAGAACATCTATTTAGTTAACTTGGTTGTCTTTGTATTGAGCCTCTCTCTTTGAGGTTATCTTTCTCTCTTTACTTC ATCTCTTTCCAGATATATTAAATTGTTTTATCTTTTATGGTAATTCTTTTTTCTCAGCCCTATCAACCTGGTTATACTGCCCCACCACCTTGTCCACGTC CTGAAGAAACTACCATCGATATTGTTGGAGGCTGGACAATCTCTGGCACACCTTTGGACTTGCATGATCCTCGACTCTTGGCGATTGCAGAGGCAGAACG GCAATTCTTGGAAGCCGAATATGATGGATATGCTTCCTCTAATGCCAGTGGAGCTGCATTCTGCCGTTCAGCTGCTCTAATTTTAATGGCACTTTTACTC TTGAGGCATGCACTTTCTGTCACAGATGCTGATGCTGAAGATGATCCATCCACTTTTTTCTCTGTATGTGATTTGAGTTCCTTTTGGCTAAATATATGGT TGCTGTTGTATTGCTTTCAAATGCACTGCCGAGCAAACCTAATTAACTCACCATTTTCTGCAGCTTTTCTTGCTTCGAGCAGCTGGTTTTCTTTTTCCTT GCTATATCATGGCTTGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_49932; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137999
| Blastp | - |
|---|---|
| Blastx | E3 ubiquitin-protein ligase MARCH3 from Mus with 41.38% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445941.1) |
| Pfam | Protein of unknown function (DUF3675) (PF12428.7) |
| Rfam | - |
| GO | - |