Id Trinity | FTRINITY_DN55270_c3_g7_i1 |
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Name Transcript | Ll_transcript_137715 |
Sequence | CAGCGAGTCATTTTTTGAGGCATCCCTTTTACGAGACCCCACGAGTGCCCTTCTATTCTATTACCCCAAAACCCAAACCCCTCTCTCTCTCTCTCTCTTC AATCCTGAGTTGTAACCTACTACTCATTTTCTTTTCCTTTAGTCTCTCTCTCTGTTTCTGAGAACCCCACAAGGAAAAACTCACAGTCTCACTTGCTTCC AAACTAAACACAACACTTTGTTTCTATCTCTATCTCTCTACAACCCTACAGTGTCTAATAAAGGGAAAGAAAATAAAGTATGGAAGGTGAGTGAGTGAGT GAATGAATGATCATTTTGTGTGATACCCCAACAAAGAAAATATAAAATAGATTGAGAAAGAGAGTGAGAGAGAGAGTCCCCACCTCTTTCAAGTAATGGA ACTATCAGATTTACAAAACAACAACAACAGCAAGAAGAAGAAGAAGAATGAAAGTATTGATCAGCACCCACCTTCTCAACCTCATGTGGGCCCTCTTCAT ATCATGGGCTCCATCAACCATCCTTCTAATTCTTCTTCAAATTCTTCTAATTCTTCTTCTCCTTCAACAACAACAACAACAGTTCCTTCTCCACTACCCA GATCTGAACCTCAACTCTCTATCTCTACCATCCCTAAACGATCCACCAAGGACCGCCACACCAAGGTAGACGGCCGCGGCCGCAGAATTCGAATGCCAGC CACCTGTGCCGCTAGGGTTTTCCAATTGACAAGAGAATTGGGACACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTACAGCAGGCGGAGCCCGCCATC ATCGCCGCCACTGGTACTGGAACAATCCCGGCTAATTTCTCGACCCTCAACTTGTCGATTCGCACCAGTGGGACGACGCTGTCGGCTCCGGCGTCGAAAT CGGCACCGCACACGTTTCATGGAGCGTTGGCACTGGCTCACCACCACCCTTATGAGGAAGCGTTCCATCACACAGCGATGTTAGGGTTTCAGCATCATAG CCTGTTAACCGGTGAGCCAATTCTTGGTAGCAGTGGTGGTGAGTCGAGCGAGAACTATATGAGAAAACGGTTCAGAGAAGATTTGTTTAAAGATGATAGT AACAATTCGCAAAATGAAAATGATCATGATGGTAATGCTTCTTCACCAAAACATTTCAAAACAAACATATCCCAACAACAACAACAACAACATCAAGGTG GTGTAGTTTCTTCTCTTCGCCCTTCAAATATGTTACCTGCAACTGCCATGTGGGCTGTGGCGGCCCCACCCACAACCACCACAACTCCTCCTCCTCCGCC TGGTAGTACTATTTGGATGCTTCCTGTTGCTGGTGGCACTACTTCTGTCACTGCTGCTCCTTCTTCAGATACACATCAGATGTGGCCTTTTACCGCCTCA GGTAGCGGCGGCGGCGGCGGCGGTGTGAATCCAGTGCATTTTATGCCAAGGTTTAATCTCCAAGGTGGAGGGGTTGAATTCCAAGGTGGAGGACGAGGTG GTGGAGGAGGGGGTGCCCTACAATTGGGTTCCATGTTAATGCAGCAACAACAACAACAGCCATCTCAGCATCTTGGGTTGGCTATGTCTGAATCAAACTT GGGTATGTTAGCTGCTCTCAATGCTTATGCTAGAGCTGGTGCTGCTTTGAACATGAATTCTGATCACCAAAGTCATCATCACATGGAGCAGCAGCAGCAT CACCATCAACACCAACACCATCATCAATCTCATGAACCTGCTGATAGTGGAGAAGATGGTGGTCCTGATAGCTCTCATTGAATGTGAACTTAATTGATTG AAAGTTGAATTTATCATAAAGTGAGTGCTTTGAAAAATGCATGGATGCTTCATCACAATTTAATTTCTTACACCATGTTGCTCTACTCATGCATTTCTTT CTTTCTTTCTTCTCTCCTTCTCTTTTGAACATGTTGATTGATCTTTAGTTTAATTTGGAGGTTTTTGGTATGTGATTGGTTAATTTACAGTTTGATTTTG GTCCAAAGGGACATAGCAGACTTAGAGAGTTTGATTGTATAGGGAGGTATATTTCTCATGATATTATTATTTACTTGTTTATTTTTTCTTTCTATGTATA ACAGTTTGAAAACAATTAAAACTCAACGATTTACGGTGAAAATTTCGATATCTTCCTTCTATTGATGCTCCTCTGTGATATATACTGCATCTTATATCTT ATTTCGâBLAST |
Tissue | flowers |
Gene name | LI_gene_50000; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137715
Blastp | Transcription factor TCP8 from Arabidopsis with 47.57% of identity |
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Blastx | Transcription factor TCP8 from Arabidopsis with 63.58% of identity |
Eggnog | Transcription factor(ENOG410YBA4) |
Kegg | Link to kegg annotations (AT1G58100) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426347.1) |
Pfam | TCP family transcription factor (PF03634.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |