| Id Trinity | FTRINITY_DN55281_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_137806 |
| Sequence | AGGAGTTCCTTCCATATCCAGTTTTGTAAATGGCTCTATCTCCACTTCACTACCACCCTCTCCCTCTTCCTTACACCTCTTCAACTCCACCACCCCTTTC AAAACCCCTTTCTTTCTCTTTCACTCCAAAACCCTTCAAAACCTTCTCTTCCACCACCACCACCGCCACCGCCACCAACCACCCTCTCCCTCCCGGTTTC ACACCCTCCCAACTCCTACACCTCCTCCGCCGCCAAAACGACGACACCTCCGCCTTCCGCATCTTCCAATGGGCCTCCTCACAACCCAATTTCTCTCCCA ATTCCTCTGTTTATCACGAAATCCTTCGCCTGCTCGCAAAATCCGGTAACTTCGATTCCATGAACACCGTTCTTCAACAAATGAAACCCTCTTCCTCCTG CCACGTCATCGATTCCGGTACCTTCTTAATCTTCGTTGAGGGTTACGCTAACTTTCACTTATATGAAGAAATCGTTAAAGTCCTTCACATTATGGAACAC GAGTTTGGGTTGAAACCCGATACACATTTCTATAACATTGTGCTGAATGCTTTGGTTGAAGGTAATAAGCTTAAGCTTGTTGAAATTGTGCATAGTGATA TGGTTAGTGCTGGTGTTAAACCTGATGTTTCGACTTTTAATGTTTTGATTAAGGCGCTTTGTAATGCACATCAATTGCGCCCCGCGATTTTGATGCTGGA GGATATGCATAATTACGGGTTGTCGCCCGATGAGAAAACGTTTACCACACTTATGCAAGGTTTTATTGAGGAAGGTGACTTGGATGGCGCGTTGAGGATC AAAGAAATGATGGTGGAGTCCGGGTGTTTGTTGACGAATGTGTCTGTGAATGTTTTGGTTAATGGTTTTTGTAAAGCGGGTAGGGTTGAGGAAGCTTTGA GCTTCATTGAGGGGGTTGCAGAGGAGGGGTTTTCGCCAAATCAGGTTACATTTAATTCTTTGGTGAATGGTTTGTGTAGGACTGGGCATACTAGGCATGC TTTGGAGATAATGGATGTGATGAATGAAAGGGGGTTCGATCCGGATGTGTATACTTATAATTCTTTGATATCTGGATTGTGTAAGTTGGGTGACATCGAT GAGGCGATTGAGATTTTGCAACAGATGGTTTTGAGAGATTGTTCACCGAACACTGTGACTTATAACACGTTGATTAGTACTCTGTGCAAGGAGAACCAGA TTGGTGCAGCCACTGAACTTGTCAATTTTCTTTCCAGCAAGGGGATATTTCCTGATGTTTGTACATTCAATACTTTGATACAAGGGCTCTGCTTGTCTAG AAACCGAGAAACCGCGATGGATGTGTTTGAGGAGATGAAGGAGAAAGGGTGTCATCCTGATGAATTTACGTATGGTATATTGATTGACAGCTTGTGTTCT GAAGGGAAACTTAAAGAAGCCATGATGCTACTGAAACAAATGGAGAAAAGTGGATGTGCTAGGAATGTGGTGGTGTACAATACTTTAATTGATGGTTTAT GCAAGCACAAAAGGATTCGGGAAGCTGAGGAGATATTTGACCAGATGGAACTCCTTGGGGTGTCAAGAAATTCTAGAACGTATAACACCCTTATTGATGG CCTGTGTAAAAGTAGGAGAGTGGAAGAAGCTGCTCAGCTTATGGATCAGATGGTAATGGAAGGACTAAAGCCTGATAAGTTCACTTATAATTCGTTGCTT ACTTTCTTCTGCCGCAATGGCGATATAAAGAAGGCAGCTGATATTGTGCAAACTATGACTTCAAATGGGTGTGAACCTGACATTGTCACCTATGGGACCC TTATTGGGGGACTATGTAAGGCAGGTAGAGTAGAGGTTGCAAGTAGGCTCCTCAGAACTATTCAGATGAAAGGTATGGTGTTGACTACTCGTGCTTATAA CCCTGTGATTCAAGGACTCTTTAGAAGAGGAAAAACACAAGAAGCAATTAGGCTTTTCAGGGAAATGATGGAGAAGGGTGATCCTCCGGATGCTGTAACG TACAAGATTGTTTACCGTGGCCTCTGTAACAGTGGAGGGCCAATTCAAGACGCTGTTGATTTTACAGTTGAGATGTTGGAGAAAGAAATATTGCCAGAGT TCTCAACCTTTGGTCTCTTGGCAGAAGGTCTTTGTTCTTTGTCTATGGACGCGACCCTCGTCGAACTCATCAATATGGTGATGGTGAAAGCCAAATTCTC CGAGGCTGAAACATCTATAATCAGAGGCTTCCTCAAGATCCAGAAATTTAGAGATGCATTGGCCAATCTCGGTGGTATCTTGGATAGAAAGTCCAGAAGA TTTTGAGTAGTGTAAAGTTTTCCTATAACTGCACTCTGGTGATACTTTAAACAGTATTAGTGGGAAAAGGTCCTCGTTGCATGAAGGTGTTGAAGAGTAT GTGGAAGCTCAAAATTCGGGACACGAGTCTATTTTACAGACTTGGAGTCAACATATTTCAGCACTAGGGGCTTCCTCCTGGCTTGCCTCATTGCCGAGTA CCTAATCTCCACCTTTGTTATTTCCAGTTTCTAGGAAAAAATGTGAACCATGTAACTTGTAGCTGACAATCATATGAATGTTGCTTAATTAATTTAAAGC ATAAGAAATGGGTCTTTCTCTTAAATTTTAAGTTTGTTATGCCAGGATGAGTAGCAGTTGTGTTTGACTTGGAAATACTGGTTAAGAATCTAGAGTCTTA AATTATTTTTATGAGTGGCAGTTTTGTATTTGACTTATTACTTTTGCTTATTTTCCCTTTCCCTTCATTAATTTGAGATTATAGAGTAACATCGTGACTC ATGAGCTGCCAGAGGAACTATCATTTTGTTATAGGGGGAACTGTGTCTTGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50089; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137806
| Blastp | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic from Arabidopsis with 68.49% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic from Arabidopsis with 70.41% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT3G53700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428536.1) |
| Pfam | Pentatricopeptide repeat domain (PF13812.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |