Id Trinity | FTRINITY_DN55284_c2_g1_i1 |
---|---|
Name Transcript | Ll_transcript_139384 |
Sequence | CATTGTTAAAATAAACTCTCTTTGTTTTTTCTTCACTCTCTCTTTTTCTTTTTCTTCTTCGATTTTCTCTTATCTCTTTATTTTCTTCTTTTTTTTCAGC CGCAGAATATGCTTCTGTCCGTTAGGGTTTCCTCGCGCTTCAAATAATGACCTCTTCAACGACGTCGTTTCCAGGCTCGGTGTTTTCGTTTCCGATCCGT CCGGAATTAGGGTTAGTGCTGACCGTACTGTGCAGGTTGTTGTTCCTAAGGTTGTGCCTCCGCCGCCTCCGCCTCCGTCGCAGGTGTTGCCTCCGTGCCA TGTGGTGCCGGCCGCGGTTGGGGTTTCGGCTGCTGATTGTGATTTGGCGGTGGAGGAGGCGGCGTCTGCGCAGGCGAAGAGGGTTGCGTTGCAGCGGAAA GGGGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTCGCCGGTTTGAGTCGCCAGAATTCGCTGATACTTCTGGAAATATCACTGGAGAAGAACTGGGCC AATCAAATGTCAAAGTCTTTTGTCGAATGTGCAACCGTGTCGAAAATGAAGGAAGTGAGAGAGCTAAAAAGATGCTTTCTTGCAAAAATTGTAGTAAGAA ATACCATAGGAACTGCTTGAGAAGTTGGGGTCAACATAGAGATTTATTTCATTGGAGTTCATGGACTTGTCGTGCTTGTCGAATTTGTGAGGCTTGCAGA AGGACCGGAGATCCAAGTAAGTTCATGTTCTGCAAAAGATGTGATGGTGCTTACCATTGTTATTGTCTGCATCCTCCTCATAAGAATGTTAGTAATGGGC CCTATTTGTGCCCAAAACACACAAGGTGTCACAGTTGTGGGTCAAATGTCCCTGGAAATGGACTGAGTCTGAGGTGGTTTCTGGGATACACCTGCTGTGA TGCCTGTGGAAGATTGTTTGGGAAAGGAAACTACTGTCCTGTTTGTTTAAAGGTTTATCGAGATTCAGAACCAACTCCCATGGTATGCTGTGATAGTTGC CAGCGCTGGGTGCATTGCCAATGTGATAATATTAGTGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCAGTATAAATGTCCGACGTGTCGTG GGGAGTGTTATCAGGTCAGGGATCTTGAGGATGCTGTTCAGGAGCTTTGGAGGCGAAGAGATATTGATGACAGAGATCTAATTGCCAGCTTGAGGGCTGC AGCTGGCTTACCAACTCAAGAAGAAATATTTTCTATTTCACCGTATTCAGATGATGAGGATAGTGGACCTGGGCGTTCCTATAAGTTCTCTCTGAAGAAT TTCTCTGATAAATCACCAAAGACCACAGATTACAGAAAGAAATCTTCAAGCAAAAAGCATTCTAAGAGAAAGGCCTCACAGTTATTTATGAATGGTAAAA CTGATCCACACCATAGTTTTGAAGGACATAGTGATGTCAAATCATTACAGAGTTTGGATAATGTCATTCAATACCACAGAAATGAATCTCATGTTTATTC ATCACCTGCTGCTGGAAGCCTGAGCCAGACTGAAGGGTCTTACCCTGTCAATCAGCCTGGGACTTTAAGACGCAAGTCTGTGGACGATGTGATGGTTAGT GATGAAGAGAGGAAAAGCAGAGTTGTTCGAATTAAAAGCAACAAGGCACATACTCTGGATAGTGAAGATGAGAGTGGAAAACACAGTGATAAGAGTCAGA ATGTGAAGGGGAAGAAGTTGGTTATAAATTTTGGGGCACGTAAAATTAATGTGGCTAGTTCTCCACGGTCTGATACTTCGAGCTGCCAAAAAGATAATCA ATATCAGATTGCCCCTAATGGAAACAAAACTGACGCTGGTCAATCAAAAGTTTTAAAGGCTTCAGGAAGAGAAGGAAATTTCATTAAGCTGGGAAAATTG AAGTCAGAAGTTTCTCAACTGAATTCAATCTCTGTTAGAGGCAATGTGTTAGACGGTTGTGAAGCTGTTCGTTCAGAGCGACCTCGCATCTTTATAGGAA AAAATTGTACAGATGGAGTGATCAATCAAGTTGGAGCCATGGACGCTATGTCGAGAGATGAAAGATTGTATTTGGGGAAGTTGTCAGAAGGCAGGTCTGG TGCACATGATGATATAGATAACAATAATAATCAGAAACCTTCACATTCTTTGCCAAAAGACCCAAAACCTTCACTGAAAATTAAATTTAAGAAACCTTCA ATTGAAAATGAAAACACTATTCATGGGGAGGAGGAGAAGATTACAATCAAGGGCCAGAGATCGAAAAGGAAGAGACCTTCACCTTTTATGGAGAAAAAAT CATTTAATGAGGATGAAGATGTAGCACAATCACATGAAGACATGGATGTGAACTTGATATTGATGAAATTAGGTAAAGGTGCAATTGGAAAGAGAGTTGA AGTTCATCAGACATCCGACAAGTCTTGGTTAGTTTCTTCTATAGCTTTTTCATCGGCCTTTTCAAATTAATGACACTATTAAATGATAGCATGCTACTGT GGATGTTGCGTCAATTACATATAATTTATTAATTTATATAAAATGAAGTTTCTAAGATGTATGCTCATTTCTCCCTCAAAATTCCAAATTTGAACAAATG GTTTGGTCAATGAATGCACTACAGTGATTTGTAGAATAATTTCTTCACTTTCCTTTACTAACTGGTCTTTCTAATTTGCAAACTTACAATGTAAATGAAT ATAAATATAATTTTATTGTATTATTTGTTAGAGGGTGAGTCATTAGGCAACAATAAGGTTGCTGCCTTGTCACCTGGAGGGAGGTCACAGGTTCAAATCC TGGAAATAGTAGTCTCCCAGTTTGCTGGAGTAGGGTTGCACACCCCACCGGGTCGGAGCTTCAAGTGCTGGCTGTCCTTATTTTTTTATTGTATTTATCG TATTTAACAATTTGATCAATACTTTTCCTTTTCCTTAGATTATTGTGTGGCAAAACTACTGTACATAATGTGATTTGGTTTACGATCTACATTTTATAAC CTTTTGATTTCATCCAGGCACAAGGGAGTGGTTACTGACACAGTTGATGGCACTTCGAAATTACATGTTACCCTAGACGACGGGAGGGTAAATACCTTAG AACTCAGTAAGCAAGCGGTCCGTTTTGTTCCCCCGAAGGAGAAGAAATCAAGAACATGAACACAACTTATCCACTCAGTGATCACTTCTTGTGGATGTTT TCCATTCATTACTTGTAGAGAGATTCAGGCCTCTAGTTACTGAACTTATATTCATGCCAGTAATATTGCTGCTGATTTTTCGCAGAAGCACTATTGGAGC AATTTCATTTTTCTTGAAGAAATTAGTAATGTCCTACTACCTCACATTTGTTTTTGAACTGCATGTTATTCAGCCTTGGTTTCTTCTTTTCTTATTTTTC TACATGATGATGTATCTGACTTCATAAAGTAGTTTCTACCTGTTATGTATAGGTCACCATTCCTTCTGAGTAGGGACAAAGGGCCCAACAGGCTTTAGAT GTATGACTATTGTTAGTTTGTTGTACTGTGAATTACAGTCTTCATTTCAGATATACTATTCGTCTTAGAATTGAAGTTTTATTTGTTAACTGGTGATTCA TCTCCATTTTCTCGAGACCTTCATAGTTTGAGACAATAGATCTTTTTCTTTAATAACAGTTTCATCAAATGTTGTTTGAACTGGACCGGACTGTATATTA TGACTTTGGGTGATAAACAATATATTAAGTGCTTTTTAAAGGTTTAGGCAAACTTTCA BLAST |
Tissue | flowers |
Gene name | LI_gene_50124; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_139384
Blastp | Histone-lysine N-methyltransferase 2B from Mus with 32.74% of identity |
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Blastx | Histone-lysine N-methyltransferase 2B from Mus with 33.5% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (75410) |
CantataDB | Link to cantataDB annotations (CNT0001633) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441112.1) |
Pfam | PHD-finger (PF00628.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |