Id Trinity | FTRINITY_DN55286_c1_g2_i3 |
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Name Transcript | Ll_transcript_138042 |
Sequence | ATAAAGATGAGTAGGAGGTTGAGATATTGTTACAATGAAGTAGCTCCATTTTGTGCATTGATAATAGTGCAATTCACTGAAGTTGGTGTCAACATTTTAT TCAAGGAAGCTACCAATAAAGGGTTGAGTTACTATGTCTTCATCTTTTATTCATTTGCTATCTCAACTCTCATTCTGCTTCTACCTTTACCCTTCATAGC CCTCAGGTTAAATGGGCTTCCTTCATTCAATTTTTCTCTTATCTGCAAAGTTTTCTCTTTGGGACTTCTTGTATTTTCAGCTCAGGTTTGTGGATATAAA GGGATTGACTATAGTTCACCATCTGTTGCTTCAGCTGTGAGCAATTTGCTTCCAGCTTTTATCTTCATACTTGCTGTCTTTTTCAGGATGGAAAAGGTAA ATTTAAGAAGTTCAAGCACTAAGGCAAAAATCATGGGTTCAATAACATCAATAGCTGGTGCATTTGTAGTTGTTCTCTATAAAGGACCTACAATCTTGAA TGCTGCATCTCCATCACAACCTCCTTCACTCGATTCTCCACTCGGCTCTTCACAAAGGAATTGGATTCTCGGCGGCTTTCTACTCACGGTTGCATATATT CTAATGTCAATCTGGTACATTTTGCTGACTCATGTTATCAAATTGTATCCGTCGGAGTTTATCGTGACCTTCTTATGCAACTTTTGTGCGACTATTATAG CGGCCCCGGTATGTTTTCTAGCTGAAGCAAACTTGGGTGCTTGGAAACTAAAACCTGATATAACACTGGTGGCTGTTATATACTCTGCATTCTTTAGCAC AATTATCAGCACTGTTATTCACACATGGAGCCTCCATATGAAAGGTCCTGTATATGTATCAATCTTTAACCCCTTATCAATTGCCATAGCTGCTGCTATG AGTGTCATATTCCTTGGTGAAGCTTTGTATCTAGGAAGTGTTGTTGGAGCAATAGTACTCTCTATTGGGTTTTATGCTGTTATATGGGGAAAAGCAAAAG AAGAATTGATTGAGGATGATGACAACTTAACCTTGAGATTTCAATCAAATAGTATGGATCCTTTGTTGCAAAGATGCAAAAGGGAAGAAACGTAAGTTAA CAGCCAGTGAAATCATGATATGTGTCATGTTTCATCATTTTTTATAAAATTATTTCTGAAATTAAATAAAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_50140; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_138042
Blastp | WAT1-related protein At5g40240 from Arabidopsis with 55.69% of identity |
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Blastx | WAT1-related protein At5g40240 from Arabidopsis with 54.19% of identity |
Eggnog | EamA-like transporter family(ENOG4111BCK) |
Kegg | Link to kegg annotations (AT5G40240) |
CantataDB | Link to cantataDB annotations (CNT0001375) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433717.1) |
Pfam | EamA-like transporter family (PF00892.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |