| Id Trinity | FTRINITY_DN55290_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_139688 |
| Sequence | GAAACTTTCTCCTCGTGAGTAAAAATAATTCTCGTAGGATTTGAATTCGTGACTTCTAAATCATAAGACAAACAATCTTAAAGCACGCCCTTTACGCCCT TTACGCCCTTTACTTACAATGTTTAATTGTATTGTTATTTGATATTTGACATGTATACTATTACAAATACTGCTTTGTTACTGCATTAAAAAAAGGAAAC AATATTTGATCTATGTTGACACAATTTGGCTATGTCCCACATTATCTCCAGTGAACTAGATATTTGATCTACATTAAAGTGGTTTGTGACTCCAAATGTT GAATTGAGGTACAAAAAACATAACACATAAATGGTGATCATGCTGTCTTCTCACTCTCCTTTCTTCCAAATTCCAACTCTTTTGATCCAACCAAGAAATC ATCATCATCATCATCATCACCAAATCACTTTTCAACAAAGCTTGTTCACTTGTGTGTATCCTTTGAGGACAAACCTCCACAAATGTTTCTTACAAAAGCA GTCCAAAGCTGAACAAGAACAAGAACAAGAAGTATTTGAATTTGAGAGGTTGTTCTCAAATCTTAACCAAGCCACTTTGAAGAGGGAACCTGGTTGGTGC ATTCTACACTTCTTTTCTCTTCTGTACAACTACTGCTATTGTGAAGTCTGTGTCCTCAAAAGTCCTTCTTGTTTATTATTATTATTATTATTACCATCTA AACTCTTCAGAGTAAAAATCTCATTTTGACAATTTAATTTATTAAAATTGTTTGTCTGTGTTGATATTTGATATTTTCAGGAAGCTTAACCAGTGCAATT TTCCTGGTTGCAGGCACTACGGTGCACCACTTTCGCTCTTTCTCTTTAGTACCAACCTTGTGTTTTCCTACCTGGTCTGCATGCATGTGTGACACCTTAG GGATACACCATATATGTTATTTGTGTTTTTAATCTCAAGATGTGATTTCAGACTTACTACCATAGTTTCTCCTTTAACCTGTTAATCTCCTCCACTTTTA GGCTCCTATAGTCTAGTAGTTTTTTTTGTAAGATGACTATATACATATATTACACTCTTACATAAACCTGGTTGTTTATTATGTTGAATGTGTATGTGCA TCAGATCAGTCTACCTCAAAATACACTACTTTATGCTTTACATAATCAGCCACAGCTATTTTTGTTATCACATACCAGTCTTGGTATAAATATTAAGACA TGCCCTTTGTTTTTGAAGAAAATTCAAGATGAATCTGCTCACAAGTGAAGACTATACTCAATATGCCCTTTGTTAAATTTTGCTATTCAATATTCATAAC TGCAAAACTTGTTAGATTATGTTTATTTGTATTCATTCTAGCATTATTTATTGTCACAATTTCCCTCAAATGTAAATAAATATCACAGGTAGGTGCAGGG ATCCTTGCAATTCCTGCAGTGACACAAGAGTCTGGCTTTTTAGCATCTGCAGTTACTTGCATCATTTGTTGGTTATTCATGGTTGTGACAGGTTTGCTTG TTGCTGAAGTGAATGTCAACACCATGTGTGAACTTGGTTCTGGTGGCGTGTCCTTGGTAATATATTTTTATGCATGGATCATGGATATGTAGAAAAAGGA TGCATGGTATTAGCAATATATTTTTAGTAACTTGATCTTGATTAAGTTCAGGTATCTATGGCCCGAAGAACTTTAGGGGAAGTTGGGGTTCAAATTTCAT GGTAAGTTCGTAAATCGTCTTTGTAAAATTTTAAGCATCTGGAACTATGGGAAAAATCAACATGCATCATATGGCTATAACCCAGACGCACTGTGTGAAC ATGCTATACTTGATTTAAGGAGGCATTAATTGCATGGAAAAGAAGAACACTTTCTGTCTCTTGTGAGACACAATGCTGCAACTTTCCTTCCTTTATAAAT TATCACCATGAACATGATTAAATTATCTAGAAACCATCATTCCTTGATAGCCTTGAAACTTTCCTTCCTTTATAAATGTACATATAATTTTAGCTACTTC TGTAAGAGGTTATGATCTTCTGTAATTACATTTCATTCTTGAACAGGTGTTTAATAATGATATTCATTTTCTTGCAGCTGGTCATACATCTTCATCCATT ATGCCCTTCTTGTTGCCTATATGGCACGTTCTTCTGATATATTGACAAATTTTCTTGGCATTCCTATATGGGGGAGTGCAACTTTGTTTTCATTGATTTT TGGAGGCATATGCTTCTTTGGAAGCCAGCGCTTTATTGGTGCAGTTAATGGAGCTCTAGTTATTGGTATCATCAGCTCTTTCGCAATTCTTGTGGCAGTT GCAAGTGGAGACCTACACTTGAGTGCTCTTTTAAAAGCTAACTTCGAAGCAGCTCCGATGAGTATACCAATTGTTGCACTCTCATTTGTTTACCAGAATG TGGTACCTGTTCTTTGCACAAATCTTGAAGGAGACTTGGTAAAAGTAAGGAGTGCAATAATCCTAGGAACTTGTATACCTCTTGTTCTGTTTCTCATTTG GAATGCTGTGATCTTAGGAACTGTCAGTGACAATGTAATGGGCCTAGATCCAATACAACAACTGCGATCTACAAATGGGACAGTTGGAGTAAGTTTATGA CAACCTCGAGCAATTTTCAGCCACAACTGTATGAAAAATACTTTAAAATATAGGGGAGTAATTTATTGACCATATTGTTTCTTATTTTATTTTATCCTCC TCAACCAAATCCTGCAGCCTATAGTTGAGGTGTTCTCACTTCTTGCTATTGCTACATCTTACATTGGATTTGTTTTGGGTTTGTCAGATTTTCTCGCAGA TTGTAAGCATTGTATCTCTCCTTGTCTTTACCTTTTTGTATGCTTCACCATGCAACTATATTGCACATCTCAAAGACTAGCAATTGACTTGAATCCACTT CTTTTTATTTTCCTATTATTCTATCTCTATGACTTGTTTCCCAAGTATTCAGATTTTTCTGATGTGAAGTTGTCACTTGTTGGTATGGAATATAACTCAT CTGAATGATACATCTATTGCTTCACTGTGTTGATTTTCAGTGCTGAAACTCCCAACAACAAGTGAGAACAGGCCACTGCCATATATACTAACTTTGGTTC CACCACTGATACTGTCGTTGTTGGATCCAGAAATATTTTTTAAAGCCTTGGACTTTGCTGGAACATACGGAGTGTTGGTCCTTTTCGGAGTTATTCCCGC TGCAATGTCCTGGTCTGATAGGTACTCAAAGTCATCTCCATCAGTGAACCTACCTGAACTAGTTCCAGGAGGGAGGATCACCCTACTAATGGTGCTTGGA GGTTCAGGATATGTACTTCTTTCTGAATTAATTGAGAACTTTCAACACCTTTAAAAACTCATGTGGTTTTTTTCTTTCAAGTCATTTAAGTTTCAACCAT AATTGAAGCATATTTTACTATCTAGAGAAAAGGAAACAGTTTTTAGAGAAGGGTCATGTACATATTATCTTTTCCATTTTGACCTTCATACTAAGTTGTT GAGGAGTAAACTTTGGCAATTTATATGGTCATGATATTCTCACAGCATTTTTTTACCCTCATTCCTTTTTACCTTACTTTATGTTCATTACTATATCAAG TTAAACATAAGCCTGATCTCATTGCTTTCTCAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50181; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_139688
| Blastp | Tyrosine-specific transport protein from Shigella with 34.92% of identity |
|---|---|
| Blastx | Tyrosine-specific transport protein from Shigella with 25.69% of identity |
| Eggnog | amino acid transport(COG0814) |
| Kegg | Link to kegg annotations (SF1953) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460267.1) |
| Pfam | Tryptophan/tyrosine permease family (PF03222.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |