| Id Trinity | FTRINITY_DN55293_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_139351 |
| Sequence | CTAGTTATCTACCATCACCACTTTAACTGCCTTACCCACTTTCCTTCTCTACACATCTCCCCTCAAACTCAATCAAAGTAAGCACTTTTTTTGTTTGTTT TTATCAATCTTCTTGTTTCTTCTGTCAAAAGAGACATCAAGGTTGAGAGAAGAAAAGGGTAGTACTATTACTACAACTACTACTCTCTCAAAGCCAAAGC CAGTAGTACCAACTACCAAGTACAAGTAGCAACTTAAGGAATATCCTCTTAGATCCCAACCCAATACTTTACCTTATTTATACTAATTTCCTTTCTTCTT ATTATTATTATTTATACACAATACATCAAAAACACTTCCTTTGCACTTTCTTCTCTCTTTCTTTTGGTCCAAATTAATACAAAACAAAAACATCTTACCT TTGTGTCTGAGTTTCCAACTAGGTATTTGATATGCAAGTGTCAGAAATCCAACAACTTCAACTCCAACTTCAAGTGAAACACCACAAACAACATAATCCT AATAACCAAGACATACCCATGTGCCAGAAGAAGATCCAAATTCAAGATGAGAAGAAGGTGATTGTGGAAGGAGATGATTTTCTCGTACCACCCCTCAATT TTGCAATGGTGGATAGTGGCATTTTTCGTTCTGGATTTCCTAAACCAGACAATTTCTCCTTCCTCCAAACACTTCGCCTCCGCTCTATCATATATCTGTG TCCTGAACCATACCCAGAGACCAACTTGGAGTTCCTCAAGTCTAATGGGATCAAGCTTTATCAATTTGGGATTGAGGGTCATAAGGAGCCTTTTGTAAAC ATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTCTCCTTGATGTCAGGAACCACCCTCTTATTATTCACTGCAAACGGGGAAAGCACCGAACAGGTT GTTTAGTAGGATGCTATAGAAAAATGCAAAAATGGTGCTTGTCATCTGTGTTTGACGAGTACCAACGCTTTGCTGCTGCAAAAGCAAGAGTTTCAGATCA GAGGTTTGTAGAGTTGTTTGATATTTCCAGCATGAAGCATTTGCCTGTAATATTTTCATGTTTGAAGAGGTAATTAACCGACCAAGTTATAATATATGCT AAGTTGGTTTTCTACTCCATACCTCATGAAAAGGGATCCCAGGTTCTGTTTGGCCTTGGAATAATAAATAGGAAAAGTTGATGAAGTCCTTCAATGCATT ACAGCAGCAAAGGAAAATTTCTTCTTCTCCAATTTCTAGAATAAGAAAATATGAGAGATATATAGTATCATAGAGCATTGTTTGTCTGTATCTGTAAGTG GTGTTATATATGATTATGCCCTATCCCCTATGAGGCCCTTATGGCGTGCCTCACTTTTGTTGTTTTATTTTTGTTTCTTTGCTGCTACTTATTCATCATG AGCAATGAGTGTAGTCATATATGTCTTGAATTTTTTGTCTCGGGGCTGGGAGAAATTCAAGGAGGGTAGAAGCCTTGTTTGTCTACCTAAAAATCTTGGT GGTTTTCATGCAGAGAAACTAATTATAAAATTTATTTGCTAGATTCTTATTGTTTATTTATTTATAAGTAATCCTGTGTTATTAAATCATTGCAACACTC ATCCACGGTTCAAGTGATATATGTTTGATTTCTCTTAATTAATGTCTTTAGTTCGATCCTTGTGGGTAGAGAAATTGTTCGCTGAGAGAGTTAGCTCCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50196; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_139351
| Blastp | Probable tyrosine-protein phosphatase At1g05000 from Arabidopsis with 76.61% of identity |
|---|---|
| Blastx | Probable tyrosine-protein phosphatase At1g05000 from Arabidopsis with 76.61% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT1G05000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455867.1) |
| Pfam | Tyrosine phosphatase family (PF03162.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |