Ll_transcript_139352

Id TrinityFTRINITY_DN55293_c2_g1_i9
Name TranscriptLl_transcript_139352
SequenceCTAGTTATCTACCATCACCACTTTAACTGCCTTACCCACTTTCCTTCTCTACACATCTCCCCTCAAACTCAATCAAAGTATTTGATATGCAAGTGTCAGA AATCCAACAACTTCAACTCCAACTTCAAGTGAAACACCACAAACAACATAATCCTAATAACCAAGACATACCCATGTGCCAGAAGAAGATCCAAATTCAA GATGAGAAGAAGGTGATTGTGGAAGGAGATGATTTTCTCGTACCACCCCTCAATTTTGCAATGGTGGATAGTGGCATTTTTCGTTCTGGATTTCCTAAAC CAGACAATTTCTCCTTCCTCCAAACACTTCGCCTCCGCTCTATCATATATCTGTGTCCTGAACCATACCCAGAGACCAACTTGGAGTTCCTCAAGTCTAA TGGGATCAAGCTTTATCAATTTGGGATTGAGGGTCATAAGGTTAATATTTTTTTGACCAATCAAATACGGCGGCGGCGAAACCGCTGAAGTGTTCTGAGA AGAACATATGCAGTGGTTCTGGATGACAGATGAAACATAGTCACACATGAAGGTTATTTTTTAAGGTGAAAATTCAGTAATTTAAAAGTTCTCATCTATT CAAACCTTGTTTTTTTAATAGATGAAGATAACCTAACTGGTTTTCCCATCAAAACTCCTCCTCACTCCCATAAATTAAGATCTCCATTTATTTTATTAAA TCACACTAATTAGTGAATGCCCTCACTCTATTACAGACATTGAACTAATGAGCTTAAGGATATTCAAATAGATCAAGCTTTAATTTTTTTATACTAAAAA CCACAATTGATTATGCCCACAAGAATCATGGGATTGTAACTTATTTGGGCTTGACTTTTTTCCATTTTGGGTGGTCTATGTTGGGTGATTGGGTCTAGTA ATTTTGTGTTGACGATGCTTGTTCCATGTCTTGATAGTTTGTACAAAAATCAATGGATATCTAATCCACTTGACATCTCCCTTTCATCCTTTGTACTCTA TGCTATTTTTTTCTTCAAGTAGGCGTGGATAATAATTAGTGACTTGGTGAGATGGGGCCATTACGTGAATGCTGTGAAGTAAAGTACTGTTTAATCAAAG AGGATTTTATAAGGTGTAGCAGGGCCATGGGAGGGGGTAATGGGGTTGTAAGGATGCATGGTTGTTTATATTATTATTGCTTGATTCTTTGGATCTAACT CTTTAGAGTGTCCAAACTTTATATACTGGTTTTGAATGATATATGTACTTGTTTCCAAACTTTCGCTTGCTAAATTTATCATCACAGCTTTTCAGATATC ATCACAATATTATCATGTCATTTGTGTTCTGGTTACTATTGTCGATTAGATCCATTATTATGATTTTAGCATATTCTTTGGGTCTAAGAGCCCTCTCTTC AAAACTCAAATATCCTCATTTTTATTAACTTTCAAAAGTATACCAACTTTGGACTACGGAATTCTTGGTCAATGGAATCCAAGCTGGCATTTCAAGTTTT TCCTTGTGAATAATTAATGTATTGGACTATCGGAGATCGTTGATTATATACTTGTTGTCTGTATATGGGACCATTATTGTGTGTATATGTCAAAAATCTA TTCTGTTCAAGCAGAAATTTGCCCTCTAATAATGCAAGTATACGGTAAAGAAACGGAACAGAATAAAATCATGATCAACTCAAGAAAGACAAGGAGTTAT TATTAGAAAAAAACATGGTTAAATTACTCTAGGCCATGAACTTTGTTTTGGATAGTAAATTACTCTTCAAGGAAAACTAGTACTTTAATTGAAGCCACCC TAGATTATGTTATCTCTAGTTTACCTTCCATTCCTTAATAAATGAGACTTCTATCTTATGTTGTTGGCATCGCATGTTTTAATTGAGAATGTCAAATTGT ATTTAACCTTATGAAATTTGTGCATACAGGAGCCTTTTGTAAACATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTCTCCTTGGTATGCTAAAACT CTTCACTTTTATCTTTACCAAAGTTTGAACTACTTCTTTTGCTAGGAGTAGTAACTTTTGGTGATTTAATAATGTAGATGTCAGGAACCACCCTCTCATT ATTCACTGTAAACGGGGAAAGCACCGAACGGGTTGTTTAGTAGGGTGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCAGTGTTTGATGAGTACCAGC GCTTTGCAGCTGCCAAAGCAAGAGTTTCAGATCAGAGGTGATGGAATGGGTGATCAGAGAGAGGCCCTACAGACCTAGGGAACTTGATTACGCTTATCTT ATTGAATTTACAACTAAGCTTCACGGAATATCACATGGTGAGAAGCTCATATCTAACATTCCTTGTGAATTTCAGAATGAGTTGCTCTACAACAATCTAG TGATTGCATGCCTGGATAAAGGTGTCATAAGGCTCTCACTCGAGTACATGAAAAAAATGAGGGAATTGGGTCATCCCATCTCACACTTGGTCTTCAACCG CCTCATAATTCTGCATTCCTCACCAAAACGCAAAAAGATGATACCCAAGTTGCTTACTCAAATGAAGGCTGACAAGGTCACTCCTCACGTGTCCACATAC AATATTCTGATGAAGATAGAAGCTAATGAGCATAATCTTGAAAACTTGGTGAAGGTGTTTGGTCGTATGAAACAAGCTCAGGTTGAACCAAATGAAATAT CTTACTGCATTTTAGCTACTGCTCACGCAGTGGCCCGATTATATACTGCAACTGAATCCTATGTTGAAGCTGTGGAGAAGTCTATTACAGGGAATAACTG GTCAACATTGGATGTCTTGCTTATGTTGTATGGGTATCTGGGGAACCAAAAGGAGTTAGAGAGAGTTTGGGGCATCATTCAAGGGTTGCCCTTTGTTAGA TGTAAAAGTTACATGTTAGCCATTGAAGCATTTGGTAGAATGGGACAGCTACCCCGGGCTGAAGAACTTTGGTTTGAAATGGAATCCAGAAAAGGATTGA AATCTGTAGAGCAATTCAATTCAATGATAACCGTTTATTGCAGACATGGATTTGTTGATAAAGCAGCTAGACTGTACAGGAATATGAAGACAAATGGATG CAAACCAAATGCCATAACTTATCGTCAGCTCGCTCTAGGCTGCTTGAAAGCAGGTATGACAGAGCAAGCTTTGAAGACCTTAGACTTGGGCTTGCGTTCG ACAATATGCAAGAAAGTTAGAAATTCAACCCCATGGTTGGAGACAACTCATTGTATTGCTGAAATTTTTGCTGAGAAAGGTGACGTGGGAAATGTTGAGA GATTGTTTGAAGAATTTCATAAAGCTAAGTATTGTAGGTATACCTTTGTATATAATACCCTGATTAAGGCTTATGTAAAAGCCAAGATTTATGATCCAAA TCTTTTGAGAAGGATGATTCTAGGAGGAGCTAGGCCAGATGCTGAAACTTACAGTTTATTGAAAGTTGCTGAGCAGTTTCGGACCTAATTTTGATTGGTA ATTCATGACAAGCTTTGTTTGTGTATCTTTCTTTTTGTCTTTCTACTTACTGAAATTATAATGTGCAATCTGATTATGCAACAAGATTCATCATGATGAT GAAAGAGTATTAAAGAACATCTACCATAAGTCAGGATTCTGCTCAATCTTCTGGCTGTTGAGTCCTATGCTTAGAGAAATTCTTAGTTGTTTCTGAATTT ATTAGACATTGTATCATTTAACATCGAGTAAATTATACTTATATCTTTGTATTCCCGTATATTTTAGTTGAATTATACAAATTATTCATCTTTTT BLAST
Tissueflowers
Gene nameLI_gene_50196; 
Additional informationdetails; 

Expression of Ll_transcript_139352

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_139352
BlastpPentatricopeptide repeat-containing protein At1g07590, mitochondrial from Arabidopsis with 66.43% of identity
BlastxPentatricopeptide repeat-containing protein At1g07590, mitochondrial from Arabidopsis with 66.35% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT1G07590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019455863.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;