| Id Trinity | FTRINITY_DN55298_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_137239 |
| Sequence | TGGCGAAAATAAAAAACCTAGGTAAAGCAACGAACGCAAGTAAGGTTATTCAGATTTCTGAATCTAATACGGTGCAGTCTTGTTAAGAGTTGCAGACATA CAGAACAAACAATGGCGACAAAAGCTTTGGGTTTCTCTGTTACTCTGAATGATTTTTCGAACCGTTTCGGTTCCAACTCACGACCCATTTCTCCCAAAGT TCGCGTTTTTACTCTTACATGTTCTGCTGGCAAGGGAGAAAGGCCTTGGAAAACTTCAGATGCTAGACTTGTTCTAGCAGATGGATCGATATGGAATGCA AAGTCATTTGGTGCTTCAGGAACACAAGTTGGAGAAGTTGTTTTTAATACATCATTGACTGGGTATCAAGAAATTCTAACAGATCCCAGTTATGCTGGCC AGTTTGTGCTAATGACAAATCCACATATCGGTAATACCGGTGTAAATTTTGATGATGAGGAATCAACACAGTGCTTCCTTGCTGGTCTAGTAATTAGAAG TCTGAGTATCAGTACCTCAAATTGGAGGTGTGCGGAAACACTTGGTGATTACTTAGCAGAAAGGAATATCATGGGAATTTATGATGTCGATACACGTGCT ATCACTCGCAGATTGCGTCAAGATGGCAGTCTTGTTGGTGTGCTGAGCACTGACAACTCGAAAAGTGATGGGGAACTACTTCAAATGTCTCGTTCATGGG ACATTGTTGGTATTGATCTTATAAGTGGAGTTTCATGTAAGTCTCCACATGAATGGGTTGATAAAACAAAGCAAGATTGGGAATTCAATTCTAAAGGACC TGGGGAAATTTTCCATATTGTTGCTTATGATTTTGGAATCAAACATAATATACTAAGGCGCCTAGCATCTTATGGCTGTAAAATCACTGTTGTACCATCT ACATGGCCAGCATCAGAAACTTTGAAGCTGAATCCAGATGGGGTACTATTCAGCAACGGTCCTGGTGATCCGTCGGCTGTCCCTTATGCCGTCGAGACGG TAAAAAATATTCTGGGAAAGGTACCTGTTTTTGGAATTTGCATGGGCCATCAATTGCTAGGACAGGCTTTAGGAGGCAAGACCTTTAAGATGAAATTTGG TCACCATGGAGGAAATCATCCCGTCCGTAATCTTCGAACCGGCCATGTTGAAATCAGTGCTCAGAACCACAACTATGCAGTTGACCCTGCCACGCTGCCA GAAGGAGTGGAGGTTACTCATATTAATTTAAATGACGGAAGTTGTGCTGGTCTTGCTTTCCCTGCTCAACGGATAATGTCTCTTCAATACCATCCTGAAG CATCCCCAGGGCCTCATGATTCTGATTACGGTAGGAAAATTCTAACTTCTGTGTCTGTGATAATGAAATTCCACAATCTTGAAAAAATTTAGGTTGCAGA ACAGGATTGGTTTTCTAGGATAACATAAGATGCATCCATCTCAACTAATTTTTGTTATGGTTTGCTTTAATTTTGATTTGAATTGGATGAATAGACACTA ATGTAATCCATTCGTATATGCAGCATTCAGGGAGTTTGTCGAACTAATGAAGCGAGAAAATGTGCATAGCGCTTGAATCGGGATGGAAAGAGTTTAGAGG AAAGTTTAGGTTAAATTTATTCATGTTCTATCATCTTTGTCTTATGAGGGTTGATTGAGGTTTTACTTTATCTCGTTTTTGTATGGCAAGCATGCCTAAG ATGGTTGTAACCCCTAATTGAGGGTTCTATGTACTTTTGCTAAGATAGTAATAACGTGCTCAAAGTTTATTATTCCTCCCAATCCATTGATGTTGTGCCT GAACATATTACTTTTCTAATCGTATTAATAATCAGATTACTAGATTAATTTCAATAAATTAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50243; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137239
| Blastp | Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.99% of identity |
|---|---|
| Blastx | Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.99% of identity |
| Eggnog | carbamoyl-phosphate synthetase glutamine chain(COG0505) |
| Kegg | Link to kegg annotations (AT3G27740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462674.1) |
| Pfam | Carbamoyl-phosphate synthase small chain, CPSase domain (PF00988.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |