| Id Trinity | FTRINITY_DN55298_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_137240 |
| Sequence | CATTTTTAGGTGTAATAATAGACAAGTATTCTTATCTGCTCTCCTTATCCTCACTTCTAGTGGAATGAAAATAAATATAATAAAAAACAAAAAAACAGAA AAGGTATGCGAAAATAAGAAACCTAGGTAAAGCAAACTTGAACGGAAATAGTGAGGTTTTGTATTCTGAATCTAACACGGTGCCGTTTGTTCATAGTTGA AGGCATATAGAAGAAGAAACAATGGCGGCAAAAGCTTTGGGTTTCTCTGTAACTCTCAATGACCTTTCGAACCGTTTCGGATCTAAATCACAACCCATTT CTCAAAAAGTTCGTGTTTCTACTCTCAGATGTTCTGCTGGGAAGGGAGAAAGACCTTGGAAAACATCAGATGCTAGACTTGTGCTAGCAGATGGGTCAAT ATGGAATGCAAAGTCATTTGGTGCTTCGGGAACACAAGTTGGTGAAGTTGTTTTTAATACATCATTGACCGGGTATCAAGAAATTATAACAGATCCTAGT TATGCTGGCCAGTTTGTGCTAATGACCAATCCACATATCGGTAATACCGGCATAAATTTTGATGATGAGGAATCAACACAGTGCTTCCTTGCTGGTCTAG TAATTAGAAGTCTGAGTATCAGTACCTCAAACTGGAGATGTGTGGAAACGCTAGGTGATTACTTAGCAGAAAGGAATATCATGGGAATTTATGATGTTGA TACACGTGCCATCACTCGCCGATTACGTCAAGATGGAAGCCTTGTTGGTGTCCTGAGCACTGACAACTCGAAAACTGATGAGGAACTACTTCAGATGTCT CACTCATGGGACATTGTTGGTATTGATCTTATAAGTGGAGTATCGTGCAAGTCTCCACATGAATGGGTTGATAAAACAAAGCAAGACTGGGAATTCAGTT CTAAAGGGCTCGGGGATAATTTCCATGTTGTTGCTTATGATTTTGGAATCAAGCATAATATACTAAGGCGCCTGGCGTCTTATGGCTGTAAAATCACTGT TGTGCCATCTACATGGCCAGCATCAGATACTTTGAAGCTGAAGCCAGATGGGGTACTTTTCAGCAATGGCCCGGGAGATCCATCTGCTGTCCCTTATGCC GTTGAGACGGTAAAGAATATTCTGGGAAAGGTACCTGTTTTTGGAATTTGCATGGGCCATCAATTGCTAGGCCAGGCTTTAGGAGGCAAGACCTTTAAGA TGAAATTTGGTCACCATGGAGGAAATCACCCTGTTCGTAACCTTCGAACTGGCAATGTTGAAATTAGTGCTCAGAACCACAACTATGCGGTTGACCCTGC AACACTGCCAGAAGGAGTGGAGGTTACTCATATCAATCTAAATGATGGAAGCTGTGCTGGTCTTGCTACTTACCGAACAATGTCTCTTCAATACCACCCC GAAGCATCCCCCGGACCTCATGATTCTGATTACGCATTTAGGGACTTTGTTGAACTAATGAAGAGGGAAAAGGTCAACAAACGTGAGCCCCAACTATCAG CAGTGTCTGCTAGGAATGCATAATGCTTGAAGCTGATAACAGGATGAAAAGTATTTGGTGGAAGCTTAGGTTTGAAGTTAGTCATGTTCTATCATCTTTG ACCCAAGAGGGTTGATTGAGGTTTAGTTTCACTCTTTTTGTACTAAGGGCATGCATGCCTAAAGTTGTTGTGACAATTTGACCCCGAGTGAGGGTTTCAT GTACTTTTGTTGAGAGAGTAATAATGAGCTCAAGGTTTTTATACTCCCCCAATCCATTGATGATTATTAAGATGAATACTTCTTAGATTTGTTTAGAGTA TGTTAAAAGATCCTTTTACATTATTTTTTTAATGATTTGTGTACTTATTTAATTGAGAGTCTAGTGTTATTATAATTAGAGATTAGTAACATGTATTTTA CGGATCAATTTACTCAAATAGTAAGTCTTTTTAGACTTACTCCAATAGTAAGTCTAAAAGACTTACTCCTCATCTTAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50243; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137240
| Blastp | Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.61% of identity |
|---|---|
| Blastx | Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.61% of identity |
| Eggnog | carbamoyl-phosphate synthetase glutamine chain(COG0505) |
| Kegg | Link to kegg annotations (AT3G27740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459030.1) |
| Pfam | Carbamoyl-phosphate synthase small chain, CPSase domain (PF00988.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |