Id Trinity | FTRINITY_DN55302_c0_g1_i9 |
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Name Transcript | Ll_transcript_64923 |
Sequence | GGAAATTTGAAACCAAACCTGAACCCGAACCCAACCCGGGTCCATTGGCCATAATGGAGACCAGCTCCTATCCTAACATGGTAAGAAGGAAGAGTGGATG GTAGTGGTTGGTTTGTAAATGCATTACCATTCATTCATTATATCCAACTTATTTCTGAACAGGACCCATGCCTAATGGTCATCAAGTCATGGCTTTTCTA AGTGGTCAACCGAATAACAAAATTTGATAAGAGAATGACCCAATTCTATGAAAAATTATGAGTTTTTTTCCATATCATGTGAGGTTGTTGATAATTAAAA ACACTAACTATGCATTTGGTGGCAGTTGATCTGCACAAATTGTTAGCTGTCCTACCCCCAACCGTATCCCATTAATATACATGTCCCCTTTCCAATATTT CTATACTTTATCATGGGTGATAGTCAATTTACTACTTAATTCTCATCTTATCAATCAATTCATTGAAAATTCAATCATTTGAATCTATCACTGATTCAAA CCATTTAGTTTCTCGAGAATTGATGTCTAAGATGAAGAATAAGTCTTTTAAACGTATAAATTGATCTCTCACCTTTACCACTACTATAATATTTATTATA TACTTACCATATAAAAATTTATACATAGTTAATATATCACAGATTTTTCATATATATATATATGTATGTATGGTCATTCCCTTGGTTAGATCTGAAAGGC TTTTTATGTTGATGTGGTTGTGTTAGTAGGGTACTACTAGTTCAGAGGTTTTGAGGATGAAGGTCACTTTGGTTTCTAGGAGTGGAAGAGAAATTGTGAA GGGTGGCATTCAGCTCGGCGATTCTGCCACTGTAGCAGATCTGCAGACGGAAATTCATAGGCGAACCAAGAAGTATCCCTCGAGGCAGCGTTTAACACTT CCTGTCCAACCGGGATCAAAGGAAAGGCCTGTAGTGCTTAATTACAACAAGAGTCTGAAAGAATATACAGATGGAAAATCAGAAACCTTAACTGTAGTAT TCAAGGACTTGGGCCCACAAGTTTCTTATCGCACACTCTTTTTCTGCGAGTATTTGGGACCTTTGCTTCTCTATCCAGTCTTCTATTATTTCCCGGTCAT CTACGAGTATCTCGGCTACAAAGGTGAACGTGTCATCCACCCTGTGCAGACATATGCCATGTACTACTGGTGTTTCCATTATGGCAAACGAATCCTGGAA ACATTTTTCGTGCATCGCTTCAGCCATGCTACCTCACCCCTTTCCAATGTGTTTCGCAACTGCGCTTATTACTGGACCTTTGGTTCATATATTGCTTACT ATGTGAACCACCCATTATATACCCCTGTAAGCGACCTCCAAGTGAAGATTGGATTTGGGTTTGGGATACTCTGTCAAGTTTCGAATTTCTTTTGCCATAT TATACTGAGGAATCTTCGCAATCCCGAGGGGAGTGGTGGATATCAAATCCCACGCGGCTTTCTCTTCAATATCGTGACCTGTGCAAATTATACAACAGAG ATCTATCAGTGGTTGGGGTTCAACATTGCAACACAAACTGTTGCAGGATATGTTTTTCTGGCGGTTGCGACTTTTATCATGTCCAATTGGGCAATTGCAA AGCACAGGCGCTTGAAGAAGTTATTTGATGGAAAGGAAGGGCGACCTAGGTATCCGCGCCGGTGGATAATATTGCCCCCATTCCTGTAGAAGTCATAGCT CACAGGATTCTGAGATTTAGAAATGTAGCTTCATCATCATCACAAACTTTACTCATTATTTCTTATATATCAGATATGAACTTGTCTTTCAATATATTTG AAGCTTTAGACTATGAAGTTGATTTACTATTTTGTAGAAAATTTATAGATTATGCTATTGGGGATGATTGTGTTTATCATATTTCATGTTTATCATATTT TACCGTTTTCATTATATCTAGCTAGCAGCATCATGTAATATTAATTAATTTCTTAAATTCATAGTAGTAAATATTTATATATTATCCAATATATTTTTTT TTGAAGAGTAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_50267; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64923
Blastp | Very-long-chain enoyl-CoA reductase from Arabidopsis with 80.06% of identity |
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Blastx | Very-long-chain enoyl-CoA reductase from Arabidopsis with 80.06% of identity |
Eggnog | Trans-2,3-enoyl-CoA(ENOG410XR2S) |
Kegg | Link to kegg annotations (AT3G55360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461885.1) |
Pfam | 3-oxo-5-alpha-steroid 4-dehydrogenase (PF02544.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |