| Id Trinity | FTRINITY_DN55307_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_64625 |
| Sequence | TGTCTTTTAATAAAATATTATATTTGGATCAAGAAGATAAAAAACATGGAGTTTGGTTGATGAAAATAACATTTACTCGAACATAAGGATAGTATCGCAC AAAGAAGAATCGAAGATCTTGTATCATTTCCATTGAATATGATGATATCTTCTTCACCAACCACATTGTTACACAGCCACAACAACACTCTCTCTTCCAC TCTCACTCATAATCATCATCATTCCATTTCATTTTCCTCCAAAACAATTGGAACCCATAAAAACAAAGTGGGTCGCATTTCTGCTTCTGCTTCTCGATCA TTTGATGTTGTCATCGTTGGTGCTGGCGTTATTGGGTTAACCATTGCTCAACAACTCTTGAAAGCTTCTGATTTATCAGTTGCAATTGTTGATAAGGCTA TTCCTTGTTCTGGTGCAACTGGTGCAGGGCAGGGATATCTGTGGATGTCACATAAGACACCAGGGAGTGCTACATGGGATCTTACATGGAGAAGTCACCA ACTTTGGAAGATGTTGGCAGAAAGCCTACAAGAGCAAGGCTTGAATCCTTTGGTGGAGTTGGGTTGGAAGAAAACAGGAAGCCTATTAGTCGGTAGAAGT CGTGCAGAATCAGACATGCTAAAAGGGAGGGTGAAACAGCTTAATGAGGCTGGGTTGAAAGCAGAGTACTTGTCTAGCAGTGATTTGTTTAAGCAGGAAC CTGATCTGTTAGTGGACGAAGACAGTGCAGCTGCATTTTTACCAGATGACTGCCAATTGGATGCCCATCTTACTGTTGCACATATCGAAAAGGCTAACAG GAATTTTGCATCTGAAGGAAGATATGCAGAATTTTATAACGAGCCAGTGAAATGTTTTATCAGGTCAGATAGCAATGGGGAGGTTAACACTGTTCAGACT TTCAAGAATACATTACACAGCAAGAAGGCAATTGTAGTTGCCACAGGTTGTTGGACTGGTTGTCTGATACAGGATTTGTTCAGAAATTGGGGAATGGAGA TAGATGTTCCGGTAAAGCCCAGAAAGGTGTGTTTATATACAGCATGAACTGGCTTACCATGCATGGCTTACAGTTATTTCATCCTTTTCCTTGTACTGTC ATTTACCATGCACTATGGTACATTTACTTTTCAGCGATAAGGAAGGTCTAGCAGTGGAATTTTTCTTATTTGCACTCTGACTTATTAGTGGTGACAGGTG GGGGCGATAAGGCAGAGAAACTTTTTATCACTGTCTCGGAGTTTCTTCTTAAAAAACTTCTAACAAGAAAGGAGATTATTAGAAATCAGTTGGGTGTGTG CTTAGCCACAATTTAGTATTTCGGTGAAAGGACTCAAAATGTCCTATCTTACAATCCATACAGTCTCTTGCTTGGAAAGTAATGAGTTCAGACATTTGTT TTACATTATTGTCCAATATTTCCTTTCATTTCAAGCTCCTATTCTTTACTTCAGGTGTGAACTTTGACCCTAATTTTTGGTTGTGCTGCTTCCATGAGTC CTTATAATTTTTAAACTAAATGCGGTGTTTTTGCCTTGTTTTCAATGATAGAAGAAGTTTAAAACCTCACTTTTTGAAACTTTAAAAATGTGTTAAATCT ATAAATTAGAAAGATAAAGTCATATACAAAATAAGTCAAGGGAAAAACGAAATCATTATCGAATCTCATGGCTGATTGATTTGTGGTTTGTAATTAATTA GCCTTACTTTTACTGTTTGAACAACATTGACTCCAGTTGCTGCTGCTTTATGAAAAACATAGGAAATCAAGAGCCTTGTGAATATTCTTTTTTTATATGC GCCTTGTGAATATTCAAAACTTTAGTTTGTATGTTGGCTTGACATCTTTCTACTGTTTTGATCTTCAAAGAGGTATTTTTTATTTAATTTCCATAACTCA TGCCTGTGGTGTTGTTTGCAGCATTAATGTTACATGTATAATGAAAAAAGCACATGTATTTATGCACATACTAACGAGATTGTATGGTCTAATTACTCTA ATGCAGGCCTATTTTTTAAGTTTGTAATTCATTTCTGTTTTGTCTGAAGGGTCACCTACTTGAGCTTCAGAATTTAAATTTCCTTCAATTGAATCATGGC CTGATGGAGGCAGGTTATGTTGATCACGCAACATTGTCCGGTTTAGAATCGTCGGATCATGGACGAGACTTATCTGTTTCAATGACAGCAACTATAGATG CAGGAGGGAATCTTCTTATTGGTAACCTTCTTTGCTATTGCAGATCTATATGTTGACAATTGCATATGTTGCTTATAACTATTATTTATATTGAATAATT CTTTCTTCTAAAAATTTTCCAAACAAACAAGTGTGCATGGTGGTAGCTATCTATCCATTCACTTGTTTATCAAAGTTTCATTTGCATATATAAGATTTAT TGTTATATTTCTATTTTTATGAGCGATGGAACTCTGGTATTTTATTGCTTAGAAACAAGGAAAACCTCCGGAATTACAAGTGCGTTGCCGAACTTCGAGG GTCTGCACCTCCCAATGCCCAAAGGCCCCGTTTCTCTCTACAAATGACTAGATGTTCTCACCTTCTAACCCCTCCCGTATTTCTCTAGCTATCCCAATCC CAACCAACTATCTGAATAACAGATTCCTAACAGCATTCTAAATCGGGGTTACCTATCACGGAGTGGAGTGAGAGTTTGTGATCATTATTAAATTGTTAAG ACATGCATTTGGATTGAATTCATGTTTTTGGCTGAACTAAGTTAGCTATAGACTTGTAAAATAAATTTCATGAATAGACTAGTTTTTGCATTTGATGGAT ATGCTTCTATTACTCCTTCATGATTGTATCTTTTTTGTGTGCATATCTCGTGGTTAAAAAACCAAAATCTTCTATACTATGAAGGGAGTAGCCGCGAATT TGTTGGATTCAACACTGATTTGGATGAGTCTGTTGTCTCTCATATATGGAAGCGGGTTGGAGAATTTTTTCCCAAATTGAAAACGCTTTCCCTTTCAGAT CTACGCGCAAGTAGAAAAGTCAGAATAGGATTACGGCCATACATGCCCGATGGGAAGCCAGTGATTGGTCTTGTGCCAGGCTTGAAGAATGTGTACATTG CAGCAGGCCATGAAGGAGGAGGGCTTTCAATGGCTTTGGGAACTGCTGAAATGATGGTTGATATGATATTGGGTTGTCCCAGAAAAGTTGATAGTGCCCC TTATGCTGTACATAGAGTTCTTCATCACTGACATAAATGCTAGAACAGAAGTATTCTTCATACTTTTAAGGATTTTTTACCATTAATCCAAATTAGATAA GTTTGTGAACTTCATATCAACTTGAACAATTGTTGGTTCAAGTGGTATATGTTTGATTCCTCTTAAGTAATGTCTCGAGTTCGAGTATTGTGGATGGAAA AAATCTCCGCTGGGAGACTTAGCCCCACATATTTGTGGATGTTCCTGGCTCGGACAAGATTGTCTCCAGTGTAAGGATATTCGTGGGAAACAAAAAAAAC TTAATATAAAGACTTAAATACACTTTTTTTTAATCTATTTACTAATATTCAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50307; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64625
| Blastp | Monomeric sarcosine oxidase from Bacillus with 23.58% of identity |
|---|---|
| Blastx | D-amino acid dehydrogenase from Yersinia with 34.02% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461232.1) |
| Pfam | Thi4 family (PF01946.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |