Id Trinity | FTRINITY_DN55307_c3_g2_i8 |
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Name Transcript | Ll_transcript_64660 |
Sequence | TGTCTTTTAATAAAATATTATATTTGGATCAAGAAGATAAAAAACATGGAGTTTGGTTGATGAAAATAACATTTACTCGAACATAAGGATAGTATCGCAC AAAGAAGAATCGAAGATCTTGTATCATTTCCATTGAATATGATGATATCTTCTTCACCAACCACATTGTTACACAGCCACAACAACACTCTCTCTTCCAC TCTCACTCATAATCATCATCATTCCATTTCATTTTCCTCCAAAACAATTGGAACCCATAAAAACAAAGTGGGTCGCATTTCTGCTTCTGCTTCTCGATCA TTTGATGTTGTCATCGTTGGTGCTGGCGTTATTGGGTTAACCATTGCTCAACAACTCTTGAAAGCTTCTGATTTATCAGTTGCAATTGTTGATAAGGCTA TTCCTTGTTCTGGTGCAACTGGTGCAGGGCAGGGATATCTGTGGATGTCACATAAGACACCAGGGAGTGCTACATGGGATCTTACATGGAGAAGTCACCA ACTTTGGAAGATGTTGGCAGAAAGCCTACAAGAGCAAGGCTTGAATCCTTTGGTGGAGTTGGGTTGGAAGAAAACAGGAAGCCTATTAGTCGGTAGAAGT CGTGCAGAATCAGACATGCTAAAAGGGAGGGTGAAACAGCTTAATGAGGCTGGGTTGAAAGCAGAGTACTTGTCTAGCAGTGATTTGTTTAAGCAGGAAC CTGATCTGTTAGTGGACGAAGACAGTGCAGCTGCATTTTTACCAGATGACTGCCAATTGGATGCCCATCTTACTGTTGCACATATCGAAAAGGCTAACAG GAATTTTGCATCTGAAGGAAGATATGCAGAATTTTATAACGAGCCAGTGAAATGTTTTATCAGGTCAGATAGCAATGGGGAGGTTAACACTGTTCAGACT TTCAAGAATACATTACACAGCAAGAAGGCAATTGTAGTTGCCACAGGTTGTTGGACTGGTTGTCTGATACAGGATTTGTTCAGAAATTGGGGAATGGAGA TAGATGTTCCGGTAAAGCCCAGAAAGGTGTGTTTATATACAGCATGAACTGGCTTACCATGCATGGCTTACAGTTATTTCATCCTTTTCCTTGTACTGTC ATTTACCATGCACTATGGTACATTTACTTTTCAGCGATAAGGAAGGTCTAGCAGTGGAATTTTTCTTATTTGCACTCTGACTTATTAGTGGTGACAGGTG GGGGCGATAAGGCAGAGAAACTTTTTATCACTGTCTCGGAGTTTCTTCTTAAAAAACTTCTAACAAGAAAGGAGATTATTAGAAATCAGTTGGGTGTGTG CTTAGCCACAATTTAGTATTTCGGTGAAAGGACTCAAAATGTCCTATCTTACAATCCATACAGTCTCTTGCTTGGAAAGTAATGAGTTCAGACATTTGTT TTACATTATTGTCCAATATTTCCTTTCATTTCAAGCTCCTATTCTTTACTTCAGGTGTGAACTTTGACCCTAATTTTTGGTTGTGCTGCTTCCATGAGTC CTTATAATTTTTAAACTAAATGCGGTGTTTTTGCCTTGTTTTCAATGATAGAAGAAGTTTAAAACCTCACTTTTTGAAACTTTAAAAATGTGTTAAATCT ATAAATTAGAAAGATAAAGTCATATACAAAATAAGTCAAGGGAAAAACGAAATCATTATCGAATCTCATGGCTGATTGATTTGTGGTTTGTAATTAATTA GCCTTACTTTTACTGTTTGAACAACATTGACTCCAGTTGCTGCTGCTTTATGAAAAACATAGGAAATCAAGAGCCTTGTGAATATTCTTTTTTTATATGC GCCTTGTGAATATTCAAAACTTTAGTTTGTATGTTGGCTTGACATCTTTCTACTGTTTTGATCTTCAAAGAGGTATTTTTTATTTAATTTCCATAACTCA TGCCTGTGGTGTTGTTTGCAGCATTAATGTTACATGTAATGAAAAAAGCACATGTATTTATGCACATACTAACGAGATTGTATGGTCTAATTACTCTAAT GCAGGCCTATTTTTTAAGTTTGTAATTCATTTCTGTTTTGTCTGAAGGGTCACCTACTTGAGCTTCAGAATTTAAATTTCCTTCAATTGAATCATGGCCT GATGGAGGCAGGTTATGTTGATCACGCAACATTGTCCGGTTTAGAATCGTCGGATCATGGACGAGACTTATCTGTTTCAATGACAGCAACTATAGATGCA GGAGGGAATCTTCTTATTGGGAGTAGCCGCGAATTTGTTGGATTCAACACTGATTTGGATGAGTCTGTTGTCTCTCATATATGGAAGCGGGTTGGAGAAT TTTTTCCCAAATTGAAAACGCTTTCCCTTTCAGATCTACGCGCAAGTAGAAAAGTCAGAATAGGATTACGGCCATACATGCCCGATGGGAAGCCAGTGAT TGGTCTTGTGCCAGGCTTGAAGAATGTGTACATTGCAGCAGGCCATGAAGGAGGAGGGCTTTCAATGGCTTTGGGAACTGCTGAAATGATGGTTGATATG ATATTGGGTTGTCCCAGAAAAGTTGATAGTGCCCCTTATGCTGTACATAGAGTTCTTCATCACTGACATAAATGCTAGAACAGAAGTATTCTTCATACTT TTAAGGATTTTTTACCATTAATCCAAATTAGATAAGTTTGTGAACTTCATATCAACTTGAACAATTGTTGGTTCAAGTGGTATATGTTTGATTCCTCTTA AGTAATGTCTCGAGTTCGAGTATTGTGGATGGAAAAAATCTCCGCTGGGAGACTTAGCCCCACATATTTGTGGATGTTCCTGGCTCGGACAAGATTGTCT CCAGTGTAAGGATATTCGTGGGAAACAAAAAAAACTTAATATAAAGACTTAAATACACTTTTTTTTAATCTATTTACTAATATTCAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_50307; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64660
Blastp | Monomeric sarcosine oxidase from Bacillus with 23.58% of identity |
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Blastx | Glycine oxidase from Pseudomonas with 30.09% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461232.1) |
Pfam | Thi4 family (PF01946.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |