Id Trinity | FTRINITY_DN55308_c1_g1_i13 |
---|---|
Name Transcript | Ll_transcript_63310 |
Sequence | CTGTTTTTTCTTCTTCTTTCATGCGCTGTGCTACGTTAGTATTTAAAGCTAATTTGAAAACTCAATCCCCATTCCCGCTTCTTCCTCTTCTCTCTCAAAA CTTTCACTTTCATTACGGAATCTGAATTTTCTCGTTCCTCTCTTCTCAATCAAACAAAAACTATATCCCTCTCCATCGTGAATCGTTACTCACTCGCATC TAGTTAGGAAGGTTTTTTAATTTGAATAAGGCAGTTCGTTTTAGCTGAGGCGTGAATCATAAATTTGACAACAACGAGGAATGGCTGAACAGCACAAGGA ATCCTCATCTGCAGATTCAAAGGAAAAAAGTTCATTGCTAGATGACAAAATTGGAAAGGAGTTTCTTAGCTCCTGGAAATCCATGTCAATGGCTGATGAT GATGCAATGGACTTTAGCTTTGACACTGTCCCTAAAGGGAGAAAAAAGACATTTGACTTTGACAAACTGGACATGAATTTTAATCTGGATGATGACTTTG GCAAGATATCATCATTTAAGGTGGACATGTCCGACCTTGATTTTACATGCCCACCCAAGAACTCTCCCCAGTCTAAGGATAAAAAAGGAGAATCTTCTGG TACAAAAGCAGGGAAACAAGATGGGTTTAATTTCAGCTTTGATTTTAATGAGTTGGATAGCTTCAATCTTGACTCAAGCTCAATAAAAGGAGATACTAGT TCCAACAGTAACCTGAGAAAAAAAGGGGTTAATACAGAAGGAAGTGATAGTGAAGGTCCTAAAAAGCCTAAAATCAATGATGATGAAAGTGGTCATGCAT CTAACAACAGCATGGCTATGAAACCTCCAGTATCAGAGAAGCTGGAAACTTCGAAGGTTGATAATGTGGTTGGTAACCTTGGGAGTGTAACTTCCGGAAA GGGTGCTTTTGCATCCAAGTTTTCGTCCTCCGGGATCCCGGACATGCCAATTGAGATCCAAACTTCAGGTATAAGTAAAACTATAAGAACAAAAGAAATG GATGAAGAAAGAGACTTACCTGAGAACACAAAGTCAGCAGAATCAAAACTTGAGCAGGTTATCACTAAGGCACCTTCTCAGCCAGCTTGTCAGAATGATT CAGAGCAAGATACTGTCTCAGAACAGCATAAGATGATTTCATCTGGAACAAAAGTAATTAATGTTTCAGGTAAGAAAGAAAAGGTTGCTGATAAGGCAAC CTGTGTGGATTCTGAGCGTGTAGACTTACAATCAGAGCAGCCATCCCTGGCTCTCGTCACTAATTCTGATAGCAGTGTTGGAGAAGCAACTAATCTAGGT AGCAGTGCCGAAGAAGTTACTAATGACCCTCATAAAAAGAATAATGATATAAGTTTTGAAAATATTTCTAAAAATGCCTTCAAAAAGATTTCATGTGACA ATGACGTTATAGAAAACAAAAAACCAGCTTTGGAGTGTCATTTGGCTTCAGAAACCAGTAAACCTGTATGTGATAGGATGATGTTAATGAAAGACAAAGA ACTCCAAGGTATGCAGCCAAACATGTCCAGAAGGCCAGAGGAAAAGTGCTTTTTAAAGCATCTCTCATCAACAGCTGGGACAAAGGGTATCTCCTTTAGC AGCCAAAAAAGTTGTGACATGAGCCCGAGGGAGAGCTACAGATCCAACGATACACAAATTGGAAGCAAATTGGTAAGGGATTCACTCCCAGGTTCTGACA AATTAAATAGAGATGGACTGGCATTGAATCACAGCACAGATGATCTTAAAAGTTGTAGTAATGGCAGGGAGAGCATTGTTTCTGATCTTATGCCAAGTGC AAGCAAGTTGGCTGGAAATATGCATTCATTCCACGACGAAGTACTTAAAAGCAAGGCCATAATGCTAGAAACTGGCAAGTCAACTAAAGAAGTTAATATG TTGAGTTCTCAAGTTAATCCTTCCTGCTTAACAGAGAAGATAGCTAAAAACACTACCCAGGTGTCTGTAAAACCTAAAGCTGAAGTTTTAGGCAAGGAGT CTTCTCAGAAACCAAGGATTACTTCCATAGAAGGAAATAAAATTTCTTCTTTTAAAACTGGAAAGATCACTCATGCTCTGTCTAGCTTAAAGGCGTTAAG GAACATTGGGGCAAACATGGTTTTAGCAGCTCCTTTACACCAAAAAGAAGCAAACTCCAAGGTAAAATCTGGACAAAATACTGAGATACAGAGCCTTACA GCATCAAAGAATGACCATCTCACCACCAGTGGCGACAATCAGAAGCCTCAAACACGATTCTTGAAGAGGAAAGCTACCGAGGTTTGTCATTTTTTATGAC ATTCCCCTTTTGACGATTGACGAAAGGAATTTCCACTCGAATTATTAGGCATCCACAACCCTTGCCTCGCCTTGCCTTTTTTAAACCTGCATATCTGCAA ATGTCTTTATTTGCTGTCTCCTACTATATACTTTTGGACTTTTGGTGCATCTTCTTCCCTTGGCCCTCACCCAGTTTAAGATGTGCTACCTTTTTTGTTG AAAATAGCCCTCCATTACTTAATGCTATTCTTAGACCAGAACATCTATAAGACGCAATTCTGCAGGTTTCAGAAGTAGATTTAACATCCTTGAGGTCCCT GAAGCGCCTATCTCAGTCTCCTAATAACGACAGGTCCCACTGAACAAATTGATTGTTTTACTTTTTCTTTTTTGGTAGACTATTTGTACTTTCTTTGATC AGTTCTTATGGACAAGTAACATAATTCTAAACACCTTCAGAAATTTTAAAAAATCTTCAGAAGAGGTCGTTCAACAGGTATATTATCAAATCTTTTATCT GATGTGTTGTCATATATTTAATGATGGCTGATAAAATGCAAGCGGGTTTGGGGATCCTAAGTATAATATTTGTCCATACTAGTTTCCTTTTCAAAATATA TATTATCCGAATTTACTTCCATGGGAGCCAGGTAGAGAGTAAGCCCCACAACATGATCTACAATCATCCAACCTTAGGACTTGAAAGTCCATCAGATATT AAAGTGATGGAAGTGGAAATATCTGATTCTGTACTGATGGAAGATAACAGCAATGTTGAAAAGGCTGAAGCATATATGAAGGAACTTGAAGATATCTGTA ACATGCTGAAAAAGAAGCGTGAGGAAGCAAAAGAATTATTAGTTCGAGCCATTGTGAACGACAATAACTTACTGATGCTTAATCATCCCATTTATGAAGA AAAAATTTGGAAGGTTCAAAAATTTGCTTCCGAATTGAAGTCTAAGGGGATTCGACCTTGATATGCAGGAAATTGTTGCACTCGGGAGGTGAGATGTGAT AAATAGGATGGAACAAAGCCACTGTCCCATTATTTGGATATTTTATAATGAAACGGAGTGAATAATACGTGTGCCTATTAAACAGAGGTATTGGATGGAA AAATCACATTGTATTGTACTCTACTTTAAACATCCAAATGATAGAGTCTAGTACGTACCATTACATCTTATTCAGCTTCTTCCCCCTGTTTCCATCGATT CAAAATATCTTAAATGTTTATCAATGGTTAGTATAAGTGTTCTCAGATATATTTATTTAAGAATTTCTCAAATTTGTTAGCAGATCTGTAGGATATCCAG ATTAATGTTA BLAST |
Tissue | flowers |
Gene name | LI_gene_50317; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_63310
Blastp | Uncharacterized protein At4g18490 from Arabidopsis with 41.74% of identity |
---|---|
Blastx | Uncharacterized protein At4g18490 from Arabidopsis with 70.69% of identity |
Eggnog | NA(ENOG410YV1B) |
Kegg | Link to kegg annotations (AT4G18490) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424568.1) |
Pfam | - |
Rfam | - |
GO | - |