| Id Trinity | FTRINITY_DN55311_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_63257 |
| Sequence | TCTCTTTGATGTCCCCACTCACTAATCCTACGTGGCCTTACATCAGCTATTATCCATTTAGCTTTCATTCTCCAAAACACCAATAAATGATGATTTTATG TCACTTTTTGCCTTAACTAATTTTCATTTTTCTCTTACAATACAAATTATATACCTTCTCCTTTTCTCCCCTTCACTCTCAAGTTGTAACCCTTTTTTTC AGACTTTTCCATGGAATCTGAATTAGATCATGGATAAAAATGTCAACTTTTCATGATTTTTGTTCAAATCAATAAGTTCTCTGCATTTTTAGGCTCAACA GGTTAATGGGTTTTTCGTCCTTATTTTGGTAACAAATAGTATGGTATAGTTGTTTCCTTTAACTGTCTCTGTGTGTAGTTGATTTTAGTCTTCACTTTTT TGTTGTTCCTGAATGCTGTATTAGGAAAAAGGGTGTATGTAGCTTAGTTTTTGAAAGGGGTTAGTGATGGTGATGTTAGGGAATGACCCAGTTGAGTCTT TTTTCAATTCCATCAATGGTATCAAAGAAGCTTTTTTACCATTGGAAGTGGGTATTAGGAAAGCAAAAAATGATTTTGAGCATTGCTGGTTAGGGACTAT TAGGAATAAGGAAAATGGGGTTCAGTTGATTGCACATGAGATTTGTGGTGTGAAGAATCAGAAGAAGAGTGGTGAGTGTGTGGTTGTTGGTGATAAGAGG AATAAAGGGTTGTCAGAGAAGGTAAATTTGAAGTCTTTTTTGGGTGTGTTTTCACAGAATGTAGAAAGTGGGAATAGTGGTGATGTGTTGAATGAGAAGG AGGAGGTGGTTATTGCTAAGGACGATGAATCATGTGTTAACTGCTTGAAGTTTTCGATAACTTGGTCTTTGATGGTTAATGGATTTCTTCAGGGCATGGC AGATCCTGTCAAACCTGGGAGAAAGAGGTTTCAGAAAATTGGTGATGAAGATAAGTTGTGTTCATGCATGAAGTCGAATGTTTCATGTGAAGTGAAGCAA AATGGATCTAAGGCTCAGTTTATTAGAACTATCGGGGACACGGGTGTGATGGAGAAGGAAGGAAAGCATGCTTCACTTGAGTGCCTTATAGGTTTTATCT TTGATCAATTTCCTCAGACTCCTCGGAGTCTTGATCAGGGAGTTCAAGAAAATGGCAATGACTTTGGGAAAAAATCTCAGGGGTCGCATCATTTTTTGTC TCATTTTAGTGACATGAATCGACTTAAACATATTTTGGAAGGACACAAAGTATATGTGGATAGGTTCTTAGGGAATTTGAGGTTTGCAAAGATGGGTGGT GTGCCATCAAATGTGATTGAAATAAGTCCTTCAACAAGCGAAGGGGGAGATAGTAGTGCTACTGTTGTAAACAGGAAAGACACCGGGGAAAGTTTCCCTC AGAAGTTTGCCACCAGCATACTCAGCGTTACGCTGTCCAACATGGCGCGTATAAGATCAAATCTTTCCACAGTTTCATTGACAGAGTTGGTTGAGATGAT ACCACAGCTGGGGCAAGTATCTACCGAGCATCCTGACAAGAAGAAACTATTCTCTGTACAAGATTTCTTCCGATACACAGAAACTGAAGGTAGGAGGTTC TTTGAGGAGCTCGATAGAGATGGTGATGGCCAAGTTACTCTAGAAGATCTAGAAATTGCAATGACAAATAGAAAGCTGCCACGAAAATACGCTCATGAAT TTATGAGACATACTAGAAGTCACTTATTTGCAAAGTCTTTTGGTTTGAAACGATTCTTATCATTAATAGAACATAAGGAGCCAACAATTCTTCGCACATA TACTTCACTATGTCTAAGCAAGTCTGGGATGCTGGAGAAGAGTGAAATATTGGAATCACTACAGAATGCAAGACTTCCTGCAAATGAAGATGATGCAGTT GCTATGATGCAATTTCTGAATGCAAATACTGAAGAATCTATTTCTTATGGACATTTCCGCAATTTCATGCTTCTGCTTCCCTCTGACCGTCTTCAAGAGG ATCCTAGGAGTATTTGGTTTGAAGCTGCAACTGTAGTTGCTGTTCCACCACCAGTTGAATTTCCTGTAGGAAGTGTTCTAAGATCTGCTTTGGCAAGTGG CTTTTCTTGTGCCCTTTCTTGTGCATTAATGCATCCAGTTGATACCGTCAAGACCCAAGTACAAGCATCAACCTTATCCTTCCCTGAAATCGTTTCGAAG CTTCCACAGATCGGGGCACGGGGTTTATACAGGGGATCAATCCCTGCAATTCTTGGACAGTTTACAAGCCATGGCTTGAGAACTGGGATATTTGAAGCTA GTAAAATGGCGTTGATAAATATTGCTCCAACACTACCACAAATGCAGCATTTATGTAGGTACACTCTATGTTATCATTCTGTAGCACAATTTTGGGAACA GTATTGCGTATTCCCTCAGAGGTGTTAAAGCAGCGGCTGCAGGCAGGTCTTTATGAAAATGTGGGTGAGGCTTTAGTTGGGACTTGGCGCCATGATGGAC TTAAGGGTTTCTTTCGTGGAACTGGAGCTACCCTTTGTCGAGAGGTTCCATTTTATGTTGCTGGTATGGGTCTGTACGATGAATCTAAAAAGGCGGTCTC AAAACTACTACGGCGGGAACTTGAGCCCTGGGAGATGGTTGTTGTCGGAGCAATAACTGGTGGCTTGGCTTCTGTCACGACAACACCTTTCGATGTCGTG AAAACTAGAATGATGACTTCACAGGGTCAGTCTGTGTCAATGTCGATGGTAGCCTTCTCTATACTTCGCCAAGAGGGACCCCTCGGCTTATTTAAAGGTG CAGTTCCCAGGTTCTTTTGGATTGCTCCTCTGGGTGCAATGAACTTTGCAGGCTATGAGCTAGCGAGGAAGGCCTTGAATAAATATGCGGAGCTGGCAGA GAATAAATCGTCTCAGAAAAAAGCAGAGAAGGTGGCCAGTTCAGAGTAATGTATTATCTGAAATTACGCTACATCCCCTTGTATGTTAGCCTGTACAGAA ACCAAATGCCAGATGGATTTTGAGCACTTTTCGGAGTTCATTGCTGTTCATGTCTGGATTCCCAATCCGCCAACATGATATGCATTTCGTTTCCTTGTTC AGATTTCATTGCTGGTCATGTCTGGATTCTCAATCTGCCGATATCGCACTGCATCACACATCTTATTTCCTTGTTCATGTTGTAGCTTTAGTCTGCCAAT TGTTGCAGCTGATTCAAATTATGTCATTTTGTGCTTTAATTATGGACTGTCTTTGGGAGAGTGCAATTGATGTCTTTATAGAATGTACAGATTTTCATAT TTTGCAACTTTCATCTTTTTGGTACATTCATCTTCCATCAATTTTTAATTGGTTTGGACACTACTCATCCATTTGGTTTCTTTCATCACCAAGTTGCTTT TTGACTTCTGACTAGTTTCATTCAAACCTAGCAAATAATTTTAATTTCTTATAACTTTTAACCCATCAGTGTTAAGAGTGTATTGTAATTCAAAGCATTG TAGTATAGGAGAATTGTATTGGGCCTCGTGTGAGTCCATTGAGTTTGTAACTTGTTTGTAACTAATCTTTGCTATTAATAGAAACAAGTAGTTGGGTTGA TAGTTGTAAACAACCTACACTTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50338; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_63257
| Blastp | Calcium-binding mitochondrial carrier protein SCaMC-1 from Oryctolagus with 22.92% of identity |
|---|---|
| Blastx | Putative mitochondrial carrier protein PET8 from Saccharomyces with 35% of identity |
| Eggnog | Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P) |
| Kegg | Link to kegg annotations (100009567) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461504.1) |
| Pfam | EF hand (PF13202.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |