Id Trinity | FTRINITY_DN55312_c3_g1_i1 |
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Name Transcript | Ll_transcript_64766 |
Sequence | GAAGCTGAAGGAGAAGAAAATGGCGACAGTACCAGGCCAACTCGTGTGGGAGATTGTTAAGAGAAACAATTCCTTTTTGGTTAAACAATTTGGAAGAGGC TCTCAGAGCATTGAATTCAGCAAAGAACCCAACAATCTCTACAACCTCAATTCTTATAAATACTCAGGATTGGCAAACAAGAAAACTGTTAGCATTCAGG CCAATGGAAAGGATCAGGGTGTGTTGTTGGCTACAACTAAGACTAAGAAGCAAAACAAGCCTTCTGCTTTGGTTCACAAATCTGTTCTGAAAAAGGATTT CAGGAGGTTGGCAAAGGCTGTGAAAAATCAGGTGGCAGATAACCACTACAGACCTGATCTGAAGAAGGCTGCTCTTGCAAGGTTGAGTGTTGTTCACAAG AGCCTCAAAATTGCCAAGTCTGGTCCTAAGAAGAGGAACAGACAGGGTGCAAGGAAATGAAGTGGTTCATGAAATTTCAATCTCATATTGCTTCCTCCCT TTCTAGTTTTTGATTGTTTCTGGAACTAATTTTTCATATTTCTGGAGTTGTTTAAAAACACATTTTATTTAGTATTCAATATAAAACTTGTTCAACCATG TTTGCATGATGAACATAGTTTTATAGAAAAGTCTAGCGAGAAGCTGCATGAATATTTTCATTTGAGGGTTTATCTTATTATATGTTTAGACTTTTAAAAT CATTTTAAAAGAGTTTATGGGTTTCAAATGTAGGATTTTATTGCAATTGGTTAACCTTTTCTCTTAGATCTTTGCTCGAGTTCGGCTTTGTTAAAGTTTA CAAACTGTGTTGGTCGATTTGAATTGGTTCATATGAACAATTCTCTTAATTATTTTATTTTTAAAAAATAACACAAGATTTTTTTTTATATATAAATATA ATCTATATATTTAATAACAACAAATATAAAATATAATCATGAAGCTAATGAGTCGAACTGTATCCAATTCAAGTTTAGCTCATTTATTTAACGAGCTGAA TTTCCAGCTCAAGTTCGACTCATTTGGTTCATGAACCAAGTTTATTGAGGTAAATAACGAATCGAGTTTCGAACGAATATC BLAST |
Tissue | flowers |
Gene name | LI_gene_50343; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64766
Blastp | 60S ribosomal protein L28-2 from Arabidopsis with 74.13% of identity |
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Blastx | 60S ribosomal protein L28-2 from Arabidopsis with 74.65% of identity |
Eggnog | protein complex subunit organization(ENOG4111T32) |
Kegg | Link to kegg annotations (AT4G29410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443475.1) |
Pfam | Ribosomal L28e protein family (PF01778.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |