| Id Trinity | FTRINITY_DN55312_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_64779 |
| Sequence | GAACCGTAAGTCCAATAAAACGGTCGAACCGGACCCTCTGAAATTAGGGTTTCACCATTGCACTATATAATCCATGCAATAAAACCCTAATTGTTGTGTA TCTCTGCTGCAGTTGAAGAAGAAAATGGCGACAGTTCCAGGGCAGCTTGTGTGGGAGATCGTGAAGAACAACAACTCATTTTTGGTTAAACAATTCGGAA GGGGATCTCAGAGCATTGAATTCAGCAAAGAACCCAACAATCTCTACAACCTCAATTCTTATAAATACTCAGGATTGGCAAACAAGAAAACTGTTAGCAT TCAGGCCAATGGAAAGGATCAGGGTGTGTTGTTGGCTACAACTAAGACTAAGAAGCAAAACAAGCCTTCTGCTTTGGTTCACAAATCTGTTCTGAAAAAG GATTTCAGGAGGTTGGCAAAGGCTGTGAAAAATCAGGTATTGTTATTGGAATAATTGTACTATTCATTTGTGTGTTAATTATGATGTTTGATTGCATTAA TATTTCAGAAATATGGCCTAATTTTTTTGATATTTGTTTTTGTTGGCTGGGTTCATATTTCATAAATTGTCAATTTTAATCTGTGAATTGTTTATTGAAA AATGTATTTGAATACATTCCACTGATTTTTATATTTAAAGATTGACTTGCATTTCATGTTAATTGTCAACAGTTGGAATTTTTTGTTTTTATTGTTTCTG TAATTATAAGATAATTTGTTGGGATCTATGGCATGTACTATTAAATGAGTAAAATATTGTTTGCTATGATTTATGAGTGTACCAGAACTTGTTTGTGACC TGTTTCTGCGTACGTGAAACAGTCTTGATCCCACGTCAGTAAGATCGAGTGTTCCAGCAGTGATGAGCCTCTAACATATAAGAAGAATCCTATTTGGTTT TTTCAATGAAATACACATGTTACGCTTGGCTTCTGAGCTTATATCATTAAGAAATATATCACAAACATCTTCTGATCTGTTCCAAATCTTATATTGTTAG TAGAAAAATCTTGCCCACATTTCCTATTCCAATTTATCATTCCCTTCCATTACATGCATTATGTAGTCATGATCATTCTCCTTGAGAATAGTCCTTTTTG AATCTTTGCCAAATAGACCGAGATTCCCGGCAGTGATGAGGCTCTAACATATTAGAAGACTCCCTATGTGGGTTTCTCCAATGTAATATACATGTTACGC TTGGCTTCTGAGCTTCTATATCATTCAGAAGTACTTTCCCAACATATTTTTTCGGTTTCCTTGATATTATATTTGGTCTTAGTCATTCTCCTTTAGTACA AACCTTCACAAAGAATGCTAAGTTTCCAAGCATTGATGAGGCTCTAACATGTAAGATAATTCCATTAGTTGGTTTTCTTCAATGAAATATAAATGTTACG CTTGGCTTCTGAGCTTCTAACATTCAAGTGTTTTCTCCTGAATGTATTCCTTTTATTTTATCTAATATCAAATCTTTAATAGAGTAAAGTGTGCACCCTA TTTTTTATGCCAACCCATTGTTCTATATACAGGCCTGAAGTTATCTTGTAAAAAATATGTTTGTCTGAATCATCCTTATTTGATTCAAAATTACGCCAAT AAGACTAAGTTTTCCGGCAGTGATGAGGCTCTAACATTTAAGAAGACTCCCTGTGTGGGTTTCTCCTATGCAATATACATGTTACGCTTGGCTTCTGAGC TTCTATCGTTTTGATGTTCTTTCTTGATTGTTCTCTTTTATCTGTTTCTGTTTTTAACGGATGGATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50343; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64779
| Blastp | 60S ribosomal protein L28-2 from Arabidopsis with 72.64% of identity |
|---|---|
| Blastx | 60S ribosomal protein L28-1 from Arabidopsis with 73.58% of identity |
| Eggnog | protein complex subunit organization(ENOG4111T32) |
| Kegg | Link to kegg annotations (AT4G29410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443475.1) |
| Pfam | Ribosomal L28e protein family (PF01778.16) |
| Rfam | snoR24 (RF00132) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |