Id Trinity | FTRINITY_DN55312_c3_g4_i4 |
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Name Transcript | Ll_transcript_64777 |
Sequence | GAACGCTGATTATGATATCCAATAAAGAAGAGACGCGTAACATATCATGACGTGTCGATCGTAGGGTCAATGTCATCGTCCTCTATATTCTCAATTCTCA AATATATATCATTATTATATTTCTGCAAAATCTGAATCAATTGAACGAACCTTCGTATAGAAATTTCAAATCAATGGCGGAAAAGTACAATCTCAAGAAC CCCGCCGTTAAGCGGATTCTCCAGGAGGTTAAGGAGATGCAATCCAACCCTTCCCATGATTTCATGAGCCTTCCTCTCGAGGAAAATATATTTGAATGGC AATTTGCGATTAGAGGGCCTCGTGAGACTGAATTTGAGGGTGGAATATATCATGGACGGATTCAATTGCCTGCAGAGTATCCATTCAAACCTCCTTCATT TATGTTGTTGACACCTAATGGCCGTTTCGAGACCCAAACCAAGATTTGTTTGAGCATATCAAATCATCACCCTGAGCATTGGCAACCATCATGGAGTGTT AGGACTGCTTTAGTTGCACTGATTGCGTTCATGCCTACCAACCCAAATGGTGCATTGGGCTCACTGGACTACAAGGAAGAGGATAGGCGTGCCCTGGCCA TTAAATCTAGTGAAGCACCTCCAAAATTTGGAACCCCTGAACGTCAAAAGCTAATCGATGAGATACACGAGTATATGCTGAGTAAAGCAACATCTGCTCC TCTAGATAACCCTACACAAGCTCCTGAAGAACACCCTCGAAATGAGGAGGTTGAGGCCCAGGATAATTCACATAATCCGGAAGGTTCACCGGCAGAAGAG GTTCCAGATCAAGCTGGTGACAGAATTGTTGAAGAACAGGAAGTCCCTGCAAATGCTAATCCTTCAGGAGTTGAAATTCCAAGGGAGGTTCAATCAACTG CTTCAAGGAATCAGGTGCTCCAAACATCAGAGACAAGAGTTCAAAATCCAAAGCCCGCGACAAGGGTCCAAAAACCCGATGATCGGTTGTTCACTTTGGC AGCTGTTGGACTCACTGTTGCAATCGTGGTCCTTTTGCTGAGGAAGTTCATTAAATCTACCGAATATGGTGCAGTTTTCTTCAATGGATCTTAGATGTAT TCATTGTTGATGTTGGTTTCAGAGGTTAAAAATCTTAGCCACATATGAAGATATTCAAACTTAAAGAAGTGTAATATGCTAACTTCATTGTACTTGCGTT TTATACTCTATTTGTAATTATGTTAATGTATATGTGCTACAGCGTTGAATAGCTGAGTGGTGAGCAATGAACATATGGTCCTATATCATGTTATGTGACC AAATGCGATATGCTCACTATCGATTTATGAATTAATAATTTTAGTTCTACATATTTTTGTACACTTTTCCAATCGAATTGCATACAGTCTTATTTCTTTT TGCATATTATTACACTTTGCTTATGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_50346; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64777
Blastp | Ubiquitin-conjugating enzyme E2 32 from Arabidopsis with 63.23% of identity |
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Blastx | Ubiquitin-conjugating enzyme E2 32 from Arabidopsis with 63.23% of identity |
Eggnog | ubiquitin-conjugating enzyme(COG5078) |
Kegg | Link to kegg annotations (AT3G17000) |
CantataDB | Link to cantataDB annotations (CNT0000465) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440167.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |