Id Trinity | FTRINITY_DN55319_c6_g2_i2 |
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Name Transcript | Ll_transcript_64216 |
Sequence | AGCAAATGGTGGGTGTCTCCATGTTGGATCTTTCTCTCTCTCTCTTTCTTTCTTTCTTCCTTCCCTCAACACTCAAAAACTCACTTTTTTTCTTTTCCAT CACTCTCTTCTTCCCATGTTTCTCTTTGCAACTTCTTCTTCACATTTTCATCTTCTTCTTATTATCAACACATAAATAATAAGCCTTAAACCACTCTTCT TCTTTCTTTTAATTGCAGATTCTATAACGTTCAATCTTCATTTACTCTTTCTTCTTTAACCGTTATCTTATGATATGAACGTTCGTTTCTTTTATCAGTT TCCTTTTCAAGTTTTTCTTCAACTTATGCATATATCTCAATAAATATGCACAACCCTTTTCTTAAAAAGCCTCACTTTTCATTCTTTTCTCTTCTCTGAA ACCAATCTCTTATGTTTTTTTCTTGGCATGTTTATGGGTTAATCTCTAAACACTGTTCAAGGTTGTCAAGTTTCTATAGTTTTTGTGCTTCAGTTTCATC TGGGCAATTGATCAATCAAAAGTTGAAAAGGGTTTTCTGTGATCAACATTCAGAGATAAAGGAGAGGATAGTGAAGGAGTGCATTTGCATAGCAAAATGG TGTATTAATAACTAGTATAAAAGCATTGTTTGGCATTGGATTTATGGTTAGTTCCTCAAATTCCCCGGCGCAAAAGATGAGACTTCTTGAATTGTCACCC TCTGATGGAAATGGTTCCTCAGAAGAACCTTTACCTCAGGATGCAGATTATAATGGTCCATTTCTCAGTGATGAGTTAGAGACCACAATCTTGGTTAGAA TGCCAAGATCACAGCACTGGAAATTGTGTTTCTTAGATAAGCGCTTCTCGAGTCTGGTGAATAGCGGCGAAATATATAAGGTTCGAAAAGAGTTAGGATT CGTAGAACCATCAGTGTTTATGTTAGCTAGTGGTGAGAGTAACTGGTGGGGAATGGATTGGCCTTTCAAGTCAAGTAGGAAGCTTCCAATTATCCCATCA GATTATAGTTTTAAGTATGGAGATAAGGAGTCTTTCACTGCAGGGTCTCATCTCTTAGTCTCGGGCAAGGAATTCGATGGACCGGTTATTTGGAGGTACG AGTCTGCGACGAATCAATGGCTCAAGGGTCCTTTTATGAACAATCCAAGGTGTCTTTTTGCATCGGCTACTTGCGGTAATTTCGCCTTTGTTGCAGGCGG TATTGACACAAACACTTATAGCCAAGTCTTGGATACTGCAGAGAGATATAATTCACAGAGCAAGTCATGGGAACTTCTCCCGAAAATGAATCAGAAAAGG AAGTTTTGCTCTGGTTGTTTCATGGATGATAAGTTCTATGTTATTGGAGGACAAGATGAGCATCAAAAGGATCTCAATTGTGGAGAATTCTTTGATGCAA ACACAAACAGTTGGAACTTGATTCCTCAAATGTTGAAAGATATTCCTCTTTCGGTTTCGCAATCTCCACCTCTCGTCGCTGTTGCGAATAACCAGCTCTA CACACTTGATTCTTCTTCCAATGAGCTAAAGGTTTATATGAAGGAAAGCAACTTATGGAAGAAACTAGGCCGAGTTCCGGTGAGAGCTGATGCACAAGGA GGTTGGGGTGTAGCATTTAAGTCTCTAGGCGATGAGCTACTTGTAATTGGCGCGCCTTTGGTCTCTCATACGGAGCGCGCCTTGACTATATGCACTTGCT GCCCGGATCCGACTACGGAGAAATTAAGGTGGAGGCAAATTGATTGTGGCAGCATCCAGCTCAATCACTTTATCCATAATTGTGCTGTGATGGGAGGAAC CTGAAATCTCGATTTATGTTAACAAGAAGAGTAATAGTTTTCGAAACTAGCCTCGAAATAAATTTAACTTGCACTTTGCAGGTTAATTTGGAGTTATCTT TTCTTCAAACTTCTATCATTTGATCTGTGTTTGGAAAAGCTTGATGATGTAACTTTTTCCTTTCACTATGATGGAGAGTGAAAATGATAAGTACAATGCA TTGTTGGTTAAGAAAACTAGATAAGAGTGCTGAAAAACTCAAATTCTAATGTGTTTCTGTTTTTCATTGTTCAAGTGTCATGATTTAGTTACTTGTATCA AAAGTTATCATCTTATTTTGTTATGGACCATCAACTTTGAATCATTTCCTTTGATTGCCATACTTCAAAATGCTAGATGCCT BLAST |
Tissue | flowers |
Gene name | LI_gene_50403; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64216
Blastp | F-box/kelch-repeat protein At3g27150 from Arabidopsis with 53.06% of identity |
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Blastx | F-box/kelch-repeat protein At3g27150 from Arabidopsis with 53.06% of identity |
Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
Kegg | Link to kegg annotations (AT3G27150) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438664.1) |
Pfam | Kelch motif (PF01344.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |