Id Trinity | FTRINITY_DN55345_c1_g1_i5 |
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Name Transcript | Ll_transcript_63802 |
Sequence | CCTCACTACAATGCCATCAACCACAACCATTCCTACCACATTACAACAACAATATCATACTCCTTTTCCTTAATTTGCAACTTGAACTCACTTACAGAAA CCTTTCTTTGCATAAGGTACTTCATTATTTGTTCATCCAATCCTAAATATTTTGTACTCTTTCCTATTATAGCTTTGTACCACTACATGCATGTACCAAA TTCTCTTGAACACTTCACTAGTACACCTTTGTTTTTATTTATATCTGAAGTTTTGATTGGTTCTATGCAGTTAAGTGCTTTTCTCTATCATTTGGGCTAT TATGACCAACATGATCCAAATCCAACAATCCTCTATGAGGATAGAAGAAGTGTCCAACATGACAATGATGCAGAAGAAGCAAGGCATAGTCACTATTTTG GAATCTAACTTTGGTGATACAAAAACACCTTCTGAGCAATCTTCACTAAGGAGAACTCTGTCTGCTGACATGTCCTCTCAGAAATGGGTCTCTCATGAAA CCATAAAAAATGTTCCTTCATCTGAAGAAATCATGCAGCAGAACTCATCATCATGCAAAACCATTGCTGATTCATTGTCCTCAGATGAAGCTGAAGCTGA GAGGGATAGACTTGAGATATGGAGCTCAATTCAAAGGAACAAGAAAGAGGAGAAAGAGAAAGCTGGTACATATGCATTTGATATGTGGAATTCATTGGTG TCCCTTAAGGACAACAATGAAATCTCAAAATCACTTCCTGCAAGTCCTTATATTCACCCTCTTGTGAAAAGGACAAAGAGTTGTTTGAGTGAGAAGAGCC TTGAAATCTGCACTGAGAGCCTTGGTTCTGAGACTGGCTCTGATGGGTTGGTCTCATCTTACCCTTCTTCTGAGACAGAGGAAGACAAAGAAGAAGAGCA TCAACAACACCAAGAAGTTGAAGAAGAAGAAGAAAAAGTGATCATAGAAGAAGAACCAAAGTACAATTATGGAGGTGGTGCAGCTACAAAGAAATACTCT CCATCACGCTCTTTCCCTCCACCACTTCCTTCACTTGGTCCTTCACTCCACATGAGGACCCACCGTGACAATGGAAGGTTGGTCCTTGAAGCTGTTTCTG TTCCTACAAACAACAACTTTTGTGTTCAACGCCAAGATGGAAGACTTGTCCTCACTTTTGCCAATCAACAAGAAACCAAGGATGCTGCTGATGAAGTTTC TCAAGAGAATGATGATGATGGTGTTGCTGTGGAGGAGTTTGAGGAAGTTGATGGAACTATGAGTGATGTTAAGGTTGTAGAGAGTGTTGTGATAAAAAAG GCACCTTTGTTGTCTAGTGAGATTACTACTAATGGTGTTCATAGGTTAGCAATGATGATGAATAAGCCAATTGGGTTAGTTAATAAGAACCCAGATTGGT CAGAAAAGTTCAATGAAGTGGAAGTGGAAGTGGAAAAAAGTCAAGTAGCAAAATCACTTCCTCCAAAACCAAGAGTGGCTAGGTTGATTCCCTCAAAAAA TTTCAATTCTTATGAGTACTACTGGAAAACCAAGCCAACATCAGCACAAGTTGTCTCCACCACACTCTCTAACTCACTGCCATATAACTCAACATCAACC TTGGTGAACAACAATAGCACAAGCAAGGTCATTTTCTCTGGTAACATTAAACAAATGTCCAATGATCAGAGGCAACAGTTGATGGTTGTTAGAGAGAAGA ATGGTGACTACAAATTGGTTCACAATTTGGACCAGAGTTGCAAGGATTCTAGAAGGTCATTCCTATTCTGGGAACCTTATTGCATTGCCACTTCCTGAGG CACTAATATTATCCAAAATCCATTGTTTAAACACTATTTATTACTTCATCTTTAATCTCTATACAGTTCAACTGTTTCAGGGAACTGTAGTAAAATAAAA GGGAGAGGGAGACTGAAAGAGATAGTGAGGGATATATTTTATTTGTATGTTCAAAGCAAATGACTTGAACAATGTCATCATATGTTAGTATTAGTATAAT AATATATTTATATGGCTTTATTTGCTTTTCACTAAGAATTCCCTTTTTTGAACAATAAAATATTGATGCAGTATTTGACATTGTAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_50579; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_63802
Blastp | Protein FAF-like, chloroplastic from Arabidopsis with 37.55% of identity |
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Blastx | Protein FAF-like, chloroplastic from Arabidopsis with 45.51% of identity |
Eggnog | expressed protein(ENOG410YQ65) |
Kegg | Link to kegg annotations (AT5G22090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413315.1) |
Pfam | Fantastic Four meristem regulator (PF11250.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |