Ll_transcript_65092

• Id Trinity: FTRINITY_DN55356_c0_g2_i7
• Name Transcript: Ll_transcript_65092
• Sequence: CACCTATATTAATAACACGATTCAATATTAAACCTAACGAATATTCATGTTAGCCTTCTTCGTATTACTCGGATTAATTCGTCTCTCCCCTAATTCAAAC CATGTATGTATGGAAGCCTCAACCGATGACGTAAGAACAAGGTGTTTTGACCCCATAGTATCTTCCACCATGTTCAAATTCTGAAAACCAGAAGAAGAAA CCCTAATCACGATTCATCACTCCAATTAAACTCTAAACCAATCACTTCACCGCAATCATCGAATCGATTCAACAATGTCTTCATCATCGAGCAGCGGTTT AACATTCAAGCTTCACCCTCTGGTTATCCTCAACATCTCAGACCATTACACTAGGGTCAAGTCTCAGATGAACCCTCCAATATCACCTCACAACGCTACC ACCACCAATGGCGGCGACGCTGTCTGTTCTTCTACTCCGCCGCGGGTCTATGGCTGCGTTATAGGGGTTCAGAAGGGTCGAACCGTTGAGATCTTCAATA GCTTTGAGCTTCTCTATGATTCTTCCAACAATTCCCTTGATCGTCCGTTTCTTGAGAAGAAGCAAGAGCTCTATAAGAAGGTTTTCCCACACTTCTACAT ACTGGGATGGTATTCGACTGGGAGTGATGCAGAAGAACCAGATATGCTCATTCACAAAGCTGAGGTTCTGTTTGGCTCTCAAAAGAGGTGATAATATGTT GAAATTCCTCATTTTAGCCATCAAGAATGGAATCAATGTGTTCTGCTTGTGAAACTGTGCTGCTAGATGATATGAGGAGATCCACAAGGGTTTTGATACA CATGAAGTAATCCATAGTTGAGCTAGAACCTTGTGTGATAGATCCTAATTGAGAACGAATGTGACGATCCATGGATTTGGTATGGGAGGGGCAGAAAGCA TAAACTTCTTGCTATAACTGCCAAGAGTTATAACAACCAACAACATGTGGTTGTAGGCCTTTAGAAAACGAGTTCAGGAGTCAAGAAAAAATGGCTTGGT CCTGTTCCTCCCGTAGTAGATAGGCTGGGTTAATCTGATTGATTAATCTATCATCCTCAGATATAGAAATCTAAATGAAATTTCAGTACCTTTACGAACT TTGAGGTTTGATTTGAGATGATAATCACATTCATGAAGTGTTGCCACACCAAAAAATTAGTATCGATCATTTTCATTGACGGCATTGGAAGCTTGAGCTG CACTGGCACAGTGTGAAGTGGTACAACACTGGAGAATAGCGGTACTGAAGTCATATGAGGCGGTGGTGATGCCATATGGGGCGTTGTTCCAGCAGGATCA GTGTTTGTGGCCTTAACCATTGCTCTCTGATACCATTTGAGAAGTTAGAAAACAAAGGAAAATACAATGGAAACCGGAAAGAAAGAGAAATAGAGAAAGG GGGAGAGAAAGGTAACTGCTCTGTAACTGTTTTGTTTTCTATTATTAGAAGTAAATGATATAGTTACAACTGAGAGCTATTTATAGGAATAGCTTGAACT CTATATTCATAACTGCTCTGTTAGTAGTTTAATTGCACAACTGTCATATGTTTTGACAGCTTGGACAATTTGTCTATGTCTACAACCATAAACTCTATCC TACTACATAGTATTTATCTCCAGTAAGTGGAAGGATAAAACTGAGAGTGGATAGGTGTAGACCAAGTGGCAGGACCCAAAATTGAACCATGTTAACTGCA TGAGTATGATGCATGAGGTGGGACAGCCCCATATAGGATGGATGGGAATGAGTGGAGTGTGGAGGAAAGCCAGGAATATTGTATTGTGAAGATTGAGGAA CAAACCCAACCCAACAGGACTGGGACTAGGTCTGGTAGAAGAAGCTAAAACCTGTTGGGACCCCATGACAAGCTCAATAGATGCCAGCATTGCAGTATCT CATGTCCTGGCTTGTTGGACTTCATCAGTTTTTGTACTCATACTCGATCAATTAAATTAAACCATTTTATTTTCCTTAGTTTCTATCCTTTGGGAAGGGA TGGAGTATTTTCTCTCTTCATTTGTTGGCTTTAAAATGGGTTGTAGTGAAAGCCCATGAAACAATAGTGGATGTAGATGATGGTAGGGTGGGTGAGGTTA TGGGAATACATTTGGTGTGCTGATGGGCCTCGATATGGTTTCCTGGTCTGTAGTAGCTGGACAAAAATGCTTTGGTGGTTGGTATTAGTTCATTAGTTAA TGGGAAATGTTTTGGAATGTGAGATTGTTTAGAACTCTTGGAATATGAGCTGCTCTGACTCAATGGGTACCTAAATTTTTCGTTCAGGAATCATAAGCAG TATTACATAGATGACAATATGTTGGAAGATGGAGAAAATAATTACGAGGGTCAAATGCTTATTACAGCTGCATACCATGTGTCGACCCTTTCCCTTCAGA ACATTTATGTGTTGGGAGTTTCACCAGAACTATGGCTGTTGTCAGTTGGTACAGGTTATATATAGAGGATGGAGTAATAATTGAATGTGTGCTTACTCAT TTTCCAGGATACTGTCTTTCGCATGTCTCTTTGACACCTGTTATTCCTTGTTTCTCTAATGGATATCAATGAAAGTCCAGTTTATCTTCTTCTCAATCCT TCAATCAATCATTCTCAGAAGGATCTCCCAGTCAGTATTTTCGAAAGCGAACTGCATGTAATAGATGGGATTCCACAACTTATCTTTGTTCGCTCAAGTT ATACTATTGAGACTGTTGAAGCAGAACGGATCTCTGTTGATCATGTTGCACATCTTAAGCCATCTGATGGTGGTTCGGCTGCTACACAATTGGCTGCTCA CCTTACTGGTATACACAGTGCTATCAAAATGCTTCATAGTAGAATTAAGGTGTTACATCATTATCTTCTTGCAATGCAAAAAGGTGATGTTCCTTGTGAG AATTCACTATTAAGACAAGTGTCAAGTCTCCTGAGAAGATTGCCTGCTATTGAATCTGGAAAATTTCAAGATGATTTCTTAATGGAATACAATGACACCT TATTGATTAGTTACCTTGCCATGCTGACCAACTGCTCAAGTGCTACAAATGATCTGGTGGACAAATTCAATACTGCATATGATAGGCATAGCAGAAGGGG TGGACGAACTGCTTTTATGTGAAAGCTGTTTGGTTGCTCATTACTTTTTGTCTTGCAGCCTCAAACCACTTTTCCTTTAGGCATAGCTTTTTTTGCATTG GATTTGAAGAGAGAGAAATGAATAGAAAGAAAGTAAAAATGTAGAAAAGGATGACCCCTCCAACCAAAAAAAAGTATATATTTTTTCTGCATTTCTAGTA AAAAATCGTTTGCCAAGTTGTTGAGATAAAAGGGTTCAAGACATATTGTGAATTTCCATTATGAATATTTGTTGAGTTACCATCCCATCCTAGTGTTTAT TTGGTAGCGACACTTGTTGAGAGCGGTAACCATGAACTTTGAAAGTTGTTAGTTTCTCATCAAAATCAAATTTATTTATTTTTCTATTCAATCCCAATAT ACGCACAACAATTTTATTAATTCACCAGTTTTATTTCTCTCTATTAATATTATATC
• Tissue: flowers
• Gene name: LI_gene_50654;
• Additional information: details;

Expression of Ll_transcript_65092

FPKM

• FPAB: 0.8
• FPNAB: 0.8
• LF1: 0.7
• LF2: 0.8
• LF3: 0.6
• LF4: 0.8
• UF1: 0.8
• UF2: 0.7
• UF3: 0.5
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_65092

• Blastp: COP9 signalosome complex subunit 6a from Arabidopsis with 83.42% of identity
• Blastx: COP9 signalosome complex subunit 6b from Arabidopsis with 82.01% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310)
• Kegg: Link to kegg annotations (AT5G56280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419995.1)
• Pfam: Maintenance of mitochondrial structure and function (PF13012.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;