| Id Trinity | FTRINITY_DN55358_c6_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_64353 |
| Sequence | GTAACGGTATGTAACGTTTATTTGACATCAAAGAGGGATTATAATTAACTTATTTTACCATTGTGTGACAATGTAATGAAAGAGCATTATATTTGGAGAT TATAATTTAAGGATTATATATAAGAAAATAAATACGGGAAAGTAAGATTTAATTATTATAATAATTGAACCATTTGGCCACAAAACATTGATTTATCTCT TTCTTTGATTGTGGTGGGAGTGGATGATTTAAATTTGAAAGGAGAAAGAAAAGTTTGAGTGAGAGAATGGATTGCAGATTTGCGTCATTGTTCGAGAAAG TGCAACATCCATGGCTTCCCCCATCCACTTGGGAATCCATACCAAGCGAGAACGGACGATTACGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCA ACCTCCTCAATCCCTCTCTTCTCTCTCTGAGTCAACTCTGGTTGGTTTGGTGATGAATGCAATGCAAGGTTTAGAGTCTTCCCTCATTGCTATCCAAAAC ATCTCTCACATCTTCTCTACCCTTCCTCCTCATACTCACAACATCTCTTCTCTCTGGAATCGATCTTCCACCACTCATTCCTTCTCTAAAATTCTTCATT CCATTGCTTCCGTTGGTTCCCTTGTTTTCCTTCTCCGTCATTTTGTCAACTATTTCACTCATAATATCTCCACTCTTGTTAATCAAGCATTCGCGGTTGC CGTCGGCAAGGTCTTGGAAGGTTACATCTCTTCACTACACACTATTCATCCTTCCTCACTCTTAAGGCGATCCAAAAATCTTCATTCCCCTCTCTCTGGA TGTCTCAACACTGTTCTTCTTTCTGAATTTACATTGCTTGAGTTTTACCTCCACACCAAACAACTTAGGACTCAGATTCAAGCCCTCTCAACCATCTGTA ACCTTCGTAATTGGCCTCATACTTCTTTTCAGGATCTCACTGCTCAAGCTACTTCTCACTTTTCTAACTTTTACAGAGGGGGGGATTTATTGACTTTTTT GTATACCCAATTACAGGTAGCTGATCCTGCTCACTCTACCCTGCTCAAGTTTCTCTTTCTTCGATCGTCTGAACCATATTGTGGGTTCATCAGATCGTGG ATTTTCAAGGCAGAAATCTATGACCCATATAATGAGTTTATTGTAGAAAGTATGGACTCTCTATCTCCCAAGTCATGTGACGTTAAATATGGCATTTCTC TTGACCTACAATTCGCAAGCACCAGGGTACGAGATGGAGTTTCCATTCCTGCATTTCTTAAAGACTACTTGGTTCCATTTGTAAGAGCTGGTCAGCAGCT TCAAGTGCTCTTGAAATTGCTTGGACTGTGCATCCATGTTCCCGGAGACCATAGTTCAGATGACTTCCTTCCCTGCTGGAGTGGTTTTTCAAGCAATAAT CCATCTCATTCTTCTCCATTGACTTTCAGCAGAGATATTATAGCAGCTATGGTGGTTGCAAGAGAGAGTTACTATAAAAGGATGAATGATAAAATTGAAA GCCTTTTAAGTAGTTTAGAAGTTAGATATCAACAGGTTACACATGATTCAATACCTTCTTTTGATAATGGTGGAGGGGCTTTGGACAATCTTGATCAGTT CATCTCAGAAGACAAATCCATTGTTCGTCCAACAGAAGATAAAGCAAGTTCAAATATGGGCACTGATGGTTTGGGATCTGATGTCTCAAGTACAGTAGAT GATTTCTCTTTGCTGGAAGATATGTATGATTCATCTGAAAGTTCATCCTTGAGTAGCTCTGAGGAGCAATTGGAGTCTGATCTGCTTAGTGGGTGGCCTT GTCCATTAGCTGTGCAACAAAACCCTTTACCTGGATTATGCTTTAGTAAGAGTAGAACCTTACATAGTTCAATAAAAAATTCCCCTCGTCATGAAAAGTC AGGGAGTGATTTGCTTAGAAACTTTGATAAGATCGAGCCCAGTGATAATTTGGTGATGTCCTGCCACAAGGAAATGATATCAAGTAACATGTCCATTCCT CTAAATCGTGAGGAATCGAGCTCTTCATGTATATTCAGCGTTCAATACAGAGAAAGTTTGACTGATAGTTTTTCGGCAATGAGCCACCTATTGAAAAACT CATTTCTTGATGATGAATCTATTGGAAAAAAAGTGAATGAAAAGCACCTGGGATCCCTAAGATATTCCATGTCATCCCAAGATATTCTTGCCATTAGTGA TACGTTGAGAGGGGAAGTAATGAGTGAGGATCAACCAGATAACAGTACACTTGCTTCAAATTGGTATACTTTTCAACCACAAAGATTTGACCATCAGTGT AATATTCCTAGCATTAATCCCCTTAGTATGAACCCAATGTTGACAAGAAACGCATTACTTCACCAGATAGGTAGGAATCGAGAAAAAGGTAAAGCAGATC ATGAACAACCATTGCCTTACTTCAACTTTTCTATGGTGGAAGACCCTTGTAAGGTTTATCTGGACAAGTCACCCACCAACTCAAGATGTAGAGGTGCATC TTCATTTTCACTTGACAGTAGTGCGTCTACTCACGGGAGTAAGAATAATCAATGTGGCAAATTGGGCCATGGTACAGAGGATGGGTTGGTTGATGTTACC GAGAAATGTTTTGTTGCTTCATCAGATTCGAAGGACCATAAACAAGATGTTTCTACAGCTGTATCCGGTGGGAGCAGCTGGGAAAGATTGCTTGGTAGTT TTAGGGAAACCGTCAATTGTGATGCTACCCACAAGCAGAGTTTGGTGTCAACATTTGAGATACCACTGGATATTATAATAGACAAATGCTTATTGCAGGA AATTATGCTTCAGTATCCTTATCTTTATGTTTACTAGTTGATTAGTTTATGCATAATGTTATGCATTTCATTCCTCTATTGCCTCTATTTCTCTGCAGTC TGCATGATACATCAATTAAACTGGCATCAATTTGTCATGAATAACCAATCCGTTAATGAATTCTAACATCTGGGCCTTTCAATTGTGTCCATTTATCTGA CTATTTGTAACTTGCATCATTTTCTCTAAATGGATAATGCAGCCCAAATCAGCCTCTTTACTGATTAAGTTGATATGTGCCAGACTACTCGAATGCAAGT ATATGGGATTTATACTGCTTAAAAGTAGCAACTCTTGGATTGGATTGTAAAATTTTGATCGAGAATCCAAAATCATAAACGAAATGTAATTCTTACTTAT TTTATTTATTTTAAAATGTAAGAGTCCTTGATATGGGTAACTTCGTATTTCTACAATAACATCCAGATCTTGTGGGGCAGGTTGATGCCACTCAAAGTTT ATCTTCACACTAATCAATGTGCCTCTAATATTATTGTGCTTGCCTAGGTGAAAGTTATGCAGTAAACCTGTAGAAAATGGGCTACTGGTATGTTGAAGTG GATAGCGCTGATTTAATGGCCGTGTTAAGAGTTTTATATGTGGAAGTTGACGAGTGAAATAATGTAAAAAATATATATTATACTCTCAGTTACCTGTAAT TGCCAGACAGTTCTATTGTTGCTTGTCCTTAAAGATGTCAGATATAAATATGTCAGCAAGCTAATTATCAATGTTCTTGAGGAAGCATTTCAGTTGAAAG AGCATCTTTTGGCACTGCGACGATATCATTTTATGGAGTTAGCAGATTGGGCAGATTTGTTTATCTTATCTCTCTGGCATCATAACTGGTCTGTTACTGA AGCAAACGAGAGACTTTCAGAAATTCAAGGTCTACTTGAGTTGTCAATACAGAAATCTTCTTGTGAACAAGACCCTAATAAGGAAAGGTTGTTTGTGTAC ATGAAAGGAAATGGGAAATTGCCTCTTTCCACATCTGCTATCGGGGTCCGTTCTTTTGAATTCCTAGGACTGGGTTACCGTCTGGATTGGCCACTCAGTA TTGTTTTAACGCCTGCTGCATTAAAAATATATGCTGATATATTCAGCTTTTTAATACAAGTGAAGCTTGCAATTTTTTCATTGACAGATGTATGGTGCTC ATTAAAGGATTTGGTGCATACAACTGATAAGTATCTGAATTCTGAACTGCAGCAGCGTGAGGCTGGGCACCTTAATATGTTGATGAAGATGAGGCACCAG ATCAACCATTTTGTATCTACTTTGCAGCAGTATGTAGAGTCACACTTATCTCATGTGTCATGGTGCAGGTTTCTTCATTCCCTTCAGTATAAGGTGAAAG ATATGATGGATCTCGAGTCAGTGCACATGGAATATCTCGCTGATTCGTTATGCATATGTTTCTTGTCTGATGAAACAAGGACAGTAGGTAGCATTATTGA GAGCATTTTGCAATGCGCACTCGATTTCCGGTCATGTCTTACAGTTGGTGCTCGGGATATTGGAAGTGATCAGGAAGCTTTGTTAGGCATGCTTTCCAGA ATCAATATATCACAGGTGCTTTCCATAAAGCAGAAGTTTGACAGAAGTCTAAAAGAATTGCACAATTGCTACATTAACGAACCAAAACATGGAAATTTTG GGCTTTCTCGTTTCTGGGAATATCTCAATTATAATGAATATTACTCACGTGTGAGCAATGAAATGGGGTACTATGCTCTCTGAAATTGGCTAGCTGTGAA GGTGGATAATGGGATATTGTATTAGCTAAGGTCTAAGAAGCCAGCTTTGACTCAATAGCTGGAAGAAAATTCTCTGGGTTGGTTTGCCAAGTCGTGGATG TTATGAGTAGCTTTTTTGGGTATGTGATGTTAGGGATAGCTTAACCAGTTGTGTATTTGATGAAAGGAAGAGAAAAAAAATGAAATTACCCACTATATTT TTTACATGTGAATATGGATTTGGTAATGGGAAATTGAGATCCTATAGGGATCACAGTAGAGAATAGAGAATGTCTGAGGTACTGTGTCAATGACAATGTC TCAATCTACTTTACACAGGGTGTCCTTTTGATTAGCATTTTACTTCGTAATATATTCTTTTAATTTAATTTGAATTGCTCATTAATGATAGATAAGAACC AAAATGGAAGGAGAGTGTGTCTCTTTCTATATCATTGCTCATGATTAGTTGGTTGGGAAAATACTATTGACCTTCACAAGTGAACATGTGTACAATTCTA TCAGTTGTATAAATTACATGAGCGTGACACATAATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50678; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64353
| Blastp | Spindle pole body component alp4 from Schizosaccharomyces with 23.14% of identity |
|---|---|
| Blastx | Gamma-tubulin complex component 6 from Mus with 29.43% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPBC365.15) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423114.1) |
| Pfam | Spc97 / Spc98 family (PF04130.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |