Id Trinity | FTRINITY_DN55358_c7_g1_i1 |
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Name Transcript | Ll_transcript_64359 |
Sequence | ATTTAAACCAAATTATATATAAACATATCACGAATCCCGAATCACTCGCCTCTCACATTCTCCTTTCTTTGTTTCTCCAATCCACGCGCCACACTTCCCC ACGCGCTTCCGTACTCCTCCGTCGTTCCTGTTTCCGATCTGTTATACCAAATGGCCAACAGAGCTCCAATTGCTACAAGAAATTCGGCACTCATTGCCAT GATTGCGGATGAGGATACAGTAGTTGGATTTCTGTTAGCTGGAGTGGGAAATGTTGACATACGTAGGAAGACAAATTACCTAATTGTCGATTCAAAAACA ACTGTCAAACAAATTGAGGATGCATTCAAAGAATTCACAGCAAGGGAGGATATTGCTATCGTGCTGATTAGCCAATATGTTGCGAATATGATAAGGTTTT TGGTTGACAGTTATAACAAGCCCATTCCAGCAATACTTGAAATCCCTTCCAAAGATCATCCTTATGATGCTGCACATGATTCAGTTCTGTCACGAGTGAA GTATCTATTTTCTTCCGAATCAGTGGCATCCGAGAGACGCTAAATCCACCCATTTTTACTTGCAGCTTTTTATGGTGTTTATTGTCTTTCTTTGTACACT GAGTGATTAATGATCTTTTCATAAAATGTATGAATTATGTGTAGCTTAAATAAGTTGTATCATCTGCTGATATTTTTAAATTCATGTCCCAGAACTTCAA GATGGGCCAAAGTTTTATGTTATCAAGAACAGATTCATATGAAATGTGTGCTTTATATTAGGTACTAGAATTTTTTATTGATGTTTGCATGTTATGGCAT TGTAGAGCTTATGGTTCAGCAAGGCCAAATGCAGTGATTTCATCTCCTGAAATCTCATTGTCTTCCACAAATGCAACTTCATAGTAGTGTAATTTAGGAT TTTGATTAATTTTAGGATTCGATTCCGCGACTATTGGAAACCTGAGTTGTCGAATGTAGATTAGACGACGAGTCGACGACTTAGATTTTGCTCGTTGGGA GAGTTAGCCCCACATACCTGTGAATGTTTTCAGCTCGGACAAGATTGCCTCTAGTATGAGGA BLAST |
Tissue | flowers |
Gene name | LI_gene_50682; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64359
Blastp | V-type proton ATPase subunit F from Arabidopsis with 88.1% of identity |
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Blastx | V-type proton ATPase subunit F from Arabidopsis with 86.72% of identity |
Eggnog | Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity)(COG1436) |
Kegg | Link to kegg annotations (AT4G02620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448089.1) |
Pfam | ATP synthase (F/14-kDa) subunit (PF01990.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |