Id Trinity | FTRINITY_DN55361_c1_g1_i3 |
---|---|
Name Transcript | Ll_transcript_64967 |
Sequence | GCCCAAGCAACACCATAAAATTGTCTTCTTCCACAAGAAATAAAAGCAAAATAAATAAAAACTAAAACCCACATTTCAGACAAACAAAAATAACCAAAAC CCTCACTCAAAAAAAAATGGGCAGCCAATCCGCCGTGTCATTCCTCACCAACGTCGCCCGTGCCGCCATCGGCCTCGGCGCTTCCGCCGCCGCCCTCAAC TCATCCCTCTACACCGTCGACGGTGGCCAGCGCGCCGTCCTCTTCGACCGATTCCGCGGAATCCTCGACGAAACCGTCGGCGAAGGAACCCATTTCCTCA TCCCATGGATTCAGAAACCCTACATCTTCGATATCCGCACTCGCCCCCACACTTTCTCTTCAATTTCGGGCACCAAAGATCTCCAGATGGTGAACCTCAC CCTCCGTGTTCTCTCTCGCCCCGACACCGATCGCCTCTCCGTCATCGTTCAAAACCTAGGTCTCGAATACGACGAGAAGGTCCTTCCTTCAATCGGCAAC GAGGTTTTGAAAGCGGTTGTTGCTCAATTCAACGCCGATCAACTCCTCACCGAGCGTCCTAACGTCTCTAACATGGTTCGCGAAAGCCTTGTTCGTCGCG CCAAGGATTTCAACATCGTCCTTGATGACGTGGCTATCACGCATCTCTCTTATGGAGCTGAATTCTCACGGGCTGTGGAGCAGAAGCAGGTGGCGCAGCA GGAGGCTGAGAGGTCTAAGTTTGTTGTGATGAAGGCTGAGCAGGAGCGTAGGGCTGCGATTATTCGGGCTGAGGGAGAAAGTGATTCGGCTAAGCTGATT TCTGATGCAACCGCTGCGGCTGGAATGGGGCTGATTGAGCTTAGGAGGATTGAGGCATCCAGGGAGGTTGCAGCCACATTGGCAAAGTCACCGAATGTGT CTTACTTGCCTGGTGGAAAGAACTTGCTCTTGGGACTTAACCCTGCACGTTGATTTGGGTAAACTCTTCGTTATTTTTGTTTTTCGATTTTGGTTTAGTA CTAATTGTTAGGTAGTTAGTTACAATTTGTGTTAGTGTTGATTTTACTTTGTTGTAAACTGTGACAATAGATGGTTATTGATTGCAAGTCATAGCTCTAT GGCAATGTTGCATGGTGGGATTTACTAGCTGTTTGGTAATCATGAATTTAACTGTTTCTGCTATGAAATAGGATGCTATACTTGTTATGTCCATAATTTA TCTTTTGAAAGCAGTTCTGATCTTTGAATGTGTAAAAGAATCATAGGTTGTATTAGTTTCTAAAAACAAACTTAGATAAGTTGAATTGTTATAAATAAAT CCACATAAAGCTTGAATTGAAATAAATGTTATTAACGATGAGTATGCCTTTTGAGTTTTTAGCAACTATATGTGTCCAATATTGTGAAATCCGAGTCGAA CATCAAACATGAAATATGTCTATCCGATATTATCATTTTTATTTTAAGTGAACCCTCTGTTTGCTTCCCGGGTTCGTCCAGCTTAACCTGGTCAGACCGA AACTTTTACAGTCCAAACCCTTGTTTGGTTAAGAGTGTGAACTAGAGCCGTTTGCAAGCTCGGTTTGTGGTTGGACCGTCCAATCCAGTTCAGTCCTCCT ATCATCGTGTGTCTACAAGAAATTATTGTATCTGCTATCTCCATACAGCAGGTGCTCTGCGACCAACCTTGCCAAAGTGGTTATGATATTTCAAAATAAA TTGTGTTTACTTTACATATAATAATTTTTTGTTGATAATGATAATAAAGATTGGATGGGTTGCTTGTAATGCATGGGCATTTGTCCTAACGTGGTGTGTC TCATTAATTGGGTTTCAGTAGCTTTGATGAGTATAAATTTGTAGTAAGAGCTTGTGAGGTTTCTACATAAAACAGAGGGAAAGTCCTTTATGAGGTCTAC TTACCACTAACCAATCATATTATTAATCTTATTGAGTACTAGAGTACAAACAAAAGTCTCTACAAGGACTGACAATAAATTGAACCAATTCGACATTTGT TCTAAACTCGACTCACTAAATAACTTGATAAACTTGGTAAAGAACCAAACGAGTTGAACTTGAGCTAAAAGTTTGAGTTCGTTAAATAAATTAGCCGAGC TTTAGCAAAATATAGTTCAAGTTGTTAGTTTCATGAGTTGACCTAATTATATATATATACATATACTCATAGAGAATCTTTAAATTTAAACATATTAAAT ATATAATCATATTATTGCATATTTAAAAAAACATTTTATAATTATTATATAAACATATTCTTATATAAATATATGAATATAATAATATTAAAACTAAAAC TTTCA BLAST |
Tissue | flowers |
Gene name | LI_gene_50711; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_64967
Blastp | Prohibitin-3, mitochondrial from Arabidopsis with 81.88% of identity |
---|---|
Blastx | Prohibitin-3, mitochondrial from Arabidopsis with 82.95% of identity |
Eggnog | Band 7 protein(COG0330) |
Kegg | Link to kegg annotations (AT5G40770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413865.1) |
Pfam | SPFH domain / Band 7 family (PF01145.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |