Ll_transcript_63556

• Id Trinity: FTRINITY_DN55368_c0_g2_i3
• Name Transcript: Ll_transcript_63556
• Sequence: GAATCGTAAACCCTCGCCTAGAAGTTTCTTAGAGTCCCTCACTGCTCTTGCAGCAGCAACAACACTTGTTTCAACTCACATCATAACTCTTCTTATTTCT AAACGACGCCGTTTCCATTCGCATTCTCACTATATTTAGGGTTTGAATTCGAAGCTGTTTCCGCTGCTTCTTCTTCTTCTTCTTTTCTGTTAGGATCCGC TCAGGTTGGTTCATAAGAGAGAAGGGACTGGGAAGGAAAACACAGAAAAGGAAATGGGAACCGACAGTGCAGAGTGAAACTGTGAATTTTGATGGGGTGA AAGTGTTGGGTCGTCTGTGGATTGTGAATTTGTAAATAGACAAACAAGTTGTGCTGTCTGTGCGTTGTTGTTGGATTGGGTGTGTGGTAGAAATTTGGTT TTGATTTCTATTTACCCATGGAGTGCAATAAGGATGAAGCTACGAGGGCTAAGGAAATTGCTGAATGTAAAATGCAAAGTGGTGACTTTGTAGGGGCACT GAAGTTTGCTTCAAAAGCTAAACGACTCTTTCCTGACATTCAGAATATTGTTCAGATCATTACTGTATGTGAGGTTCACTGTGCTGCACAGAACAAAACC TTTGGGTCTGACATGGACTGGTATGGAATTCTTCAAACTGAACGAGTGGCTGATGAAGCAACTGTAAAGAAACAGTACAGGAAGCTCGCACTACTTCTTC ATCCTGACAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTTAAGTTGATTGGGGAGGCTAACAGGGTCTTGAGCGACCGTGTGAGGCGTTCTTTATATGA CAGGAGCTGTAGATATTCTATTGGTACTGCAGCACCAAATCCTCCATCCAATAACTCAAATGGGAGCTCATTTGTGCCGAAACATGATGGGAATGCTAGA AATTCTCAGAGTACTTTTAATTCACACTCTTCGGATGCTCATCAGTGGGATGAAAAGCTTGCATTCTGGACATCTTGCCAGCATTGTAGTACTAGGTACC AGTACTACAAAACAATTGTAAATGCAACCGTACGCTGTCAACAATGTTCTAAATCCTTTACAGCGCGTGATATGGGGTACCAGGGTGTGCCCCCAGGATA CATGTGGACATCGCTCCATAAACAGAAAGAGGCTCCAAAGCACATGCCACCAAAAGCATCAGAAAATAATGGTGGAAAAACTTGTGGTAGAGGGCAATCA GATAATTTTGTGCGGTCAAATCCTGTATCTATGACAAAATGCACTACTGGGGTTGGTGGGCATTGTAAAGTTGAAAAGCATAAAGATGGGTATGTGGCTT CAGGACGGACAAAGGCTGGTATTGGAACATCTAAGGTTGCTGAATCCAAACTGAAGGAATCACAAACCTTGCCAAATGCTAGAAGTAAGAGAGCAAGGCA GTCAGATTTCGATTCTAGGGATGATAACAAGGTTGAAAATGGCAATGGCTTGAAAAATGCCAATGTTCGAGAAAATGATGGTCATCCTTCGGTAAATAAT GCAGGAGTGAACCAAAGAAAAGCTTCCAAGCAAAAGCAGCGTGTTCCGTGCACAGAAACTGCTCAAGATGGTGATTTCGCAAATCCTTCTAAAAGGCCAC GACAATATGAATCATTTAATGCCCCTAAAGTGGAGAAAGATAAGCATGATCATGTGCAAGTAAAGGAAGCATCCAAGTCAGATCGTGATGGTGGAAAGTC AAAGGCAGACAATTGCTCTGCAGTGAATTCAAATTTCTCTCCCCAACAAGAAATCATTTGTCCTGATCCAGACTTCAGTGATTTTGATAAGGATAAGGCA GAGGATTGTTTTGCTGCTAATCAATTCTGGGCCATTTATGATGATTCTGATAGCATGCCAAGATACTATGCTCTTGTCAGGAAAGTGTTCTCCCCTTTCA AGTTGCAGATTACTTGGTTGGAACCTGACCCAGATGATCAAGGTGAGATTAATTGGGATGATGCTGGTTTACCTGTGGGTTGTGGTAAGTTCAAACTTGG TAATTCTCAGAGAACTGCTGATCTTGCTATGTTCTCCCATCAGATGCATTGCATAAAAGGCAGTAGCAAAGGTTCTTATTTAGTATTTCCCAAGAAAAGA GAGACTTGGGCACTTTTCAGAGATTGGGATATTGGATGGAGTTCTAATCGAGAAATGGATTCAGAATTTCAATTTGAATATGTGGAAGTCCTATCCGATT TTGATGAAAATGTTGGCATTGAAGTTGCGTATCTTGGCAGAGTAAAAGGGTTTGTTAGTCTTTTTCAGCAAACTGTGCACAGTGGAATTAGCTTATTGCG TGTTCCACCTAATGAGCTATATAGGTTCTCACACCGGGTTCCTTCATATAAGATGACCGGGGATGAAAGGGAAGATGTTCCAAGAGGATCTTTTGAACTT GACCCTGCTGGCCTGCCTAGTAGCCTTTTTGTAGTTGGTGATCCTTGTGATGTGAAAATGAAGGATGCAATGCTAAACAATGGTGTTAGTTGGTCACACC ATGAATCCTCTAAATGTAAAGTGGAACAGGCTATGTCGAATGAAAGTCTTCACAAAGAGAAGTTACATAAGAGTAATGATGCTGAAAGAGTATCGTCAAT CCCTAGAAGATCACCAAGGTCAAACAGAAAAGGTATGGGTAATGGTCAAGTAAGCTCTAGTCAATGTGTGATTATAGATGATGATGAAGATATTGATCAG AAGGGCTGTGGTCAACCTGAGGGAACTGCTGCTGCACATACGGCTAATGAGAAGGTCAAGACACCACGGAAACAAGAGAAAAATAATTATGAAAGAGAGA CATTGAAAGTCCGAAGGTCACCTAGAGACATAAGCAAGAAAAATGCTCAAGTAGATAAAGGTGAATGCACAACAAGCAAGGTGACTGGCAATCATTCAAA TGGCAACAAAAATATGAAGGAAAACAGTTTTACTCAGTCTGGAGGAAGTGTTCATACACCTTTGGCAAAAGCAGGTGAATGTGCAACAAGCAAGGTGGCT GATAATCAGTCAAATGTCAACAAAAATGTGAAGGGCAGCAATTTTTCTAAGTCTGGAGGAAGTGTTCAATCACCTTGGAAAAAAGATTGTGATCTCGCAG AAGCATCACGGTATGACTTTAAGAAGGAAAAATCTGAAGAGAAGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAAGGATAGGATGCCTGCTGT TTATGCTCAAATTAAGAAGATTGAATTGGCCCCTAACTTTAAGTTGCACGTGTCCCTACTTGAACCCTTCTCTTCACCAAAAGACTTCAAAAGAACAGTG TCTTGTGGCACCTTCGAAGTTAAAAAGGTCAAACCGCAAATTCTTTCTCTCTCTGAATTCTCTCATCAACTAAAAGTTGAGCCTGTGGCAAATAATTTGT ATGAAATTTACCCAAGAAAAGGTGAGGTTTGGGCTCTGTACAAGGACCAGAACTATGATTTGACTTGTTCTAACCCGGGGAGAGGTGATTATCATATGGT AGAAGTATTAGCATATACTGACAAGATTATACAAGTTGTTATTCTGACGCCTGTTAGCAGCTCTCAGCCATTTTTCAGGGCTCCTAGAATCCAGAGATCA AAGGCTGGTGTAATTGAAATATTTAAAGAAGAGGTTGGTAGATTTTCTCATCAAATTCCTGCAATTCGGCACAATTTGGAAGACAATGTTCACCTCAGAG GATGTTGGGAGCTTGATCCTGCTTCAATCCCTGGTTTTATCTGACATTGAGACCGAAGTACAGCCTTTTTTTCTCTGCTAGACTCATTTTTCATTAATTG TGGACTTAGCATTCTCTCTCTTATGTGACTTAACTAACTTTGTATGAAGTAGCAATGCATGGAAATGTGTTTCTAGGGATATTCTTATTCTGTGTTTGGA TTAAAAACGTAGTTCTTATCTTTTGCTTATGTTTGACATTGAGACATTCCATAACGATGTCTATATCATATATGATGTCCTGATTTGCTTCAATTTGATA GTTTTACACTTTTACTATATCACTCAAAGATGGTGGGTGAGCTTTACGCAATATAAGGTTGTGTGCTTAGTAATTATGATATTACATATTCAAATTCTGG AAACAACCTTTCTCTTGTAATTTAAAGATGAAAAGGCTATGCATATCTACCTTTCCG
• Tissue: flowers
• Gene name: LI_gene_50779;
• Additional information: details;

Expression of Ll_transcript_63556

FPKM

• FPAB: 3.9
• FPNAB: 7
• LF1: 5.3
• LF2: 5
• LF3: 5
• LF4: 5
• UF1: 4.4
• UF2: 4.2
• UF3: 5.3
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_63556

• Blastp: DnaJ homolog subfamily B member 12 from Bos with 32.56% of identity
• Blastx: DnaJ homolog subfamily B member 12 from Homo with 32.56% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (533603)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423228.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;