Ll_transcript_63557

• Id Trinity: FTRINITY_DN55368_c0_g2_i4
• Name Transcript: Ll_transcript_63557
• Sequence: GAATCGTAAACCCTCGCCTAGAAGTTTCTTAGAGTCCCTCACTGCTCTTGCAGCAGCAACAACACTTGTTTCAACTCACATCATAACTCTTCTTATTTCT AAACGACGCCGTTTCCATTCGCATTCTCACTATATTTAGGGTTTGAATTCGAAGCTGTTTCCGCTGCTTCTTCTTCTTCTTCTTTTCTGTTAGGTGAAAG TGTTGGGTCGTCTGTGGATTGTGAATTTGTAAATAGACAAACAAGTTGTGCTGTCTGTGCGTTGTTGTTGGATTGGGTGTGTGGTAGAAATTTGGTTTTG ATTTCTATTTACCCATGGAGTGCAATAAGGATGAAGCTACGAGGGCTAAGGAAATTGCTGAATGTAAAATGCAAAGTGGTGACTTTGTAGGGGCACTGAA GTTTGCTTCAAAAGCTAAACGACTCTTTCCTGACATTCAGAATATTGTTCAGATCATTACTGTATGTGAGGTTCACTGTGCTGCACAGAACAAAACCTTT GGGTCTGACATGGACTGGTATGGAATTCTTCAAACTGAACGAGTGGCTGATGAAGCAACTGTAAAGAAACAGTACAGGAAGCTCGCACTACTTCTTCATC CTGACAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTTAAGTTGATTGGGGAGGCTAACAGGGTCTTGAGCGACCGTGTGAGGCGTTCTTTATATGACAG GAGCTGTAGATATTCTATTGGTACTGCAGCACCAAATCCTCCATCCAATAACTCAAATGGGAGCTCATTTGTGCCGAAACATGATGGGAATGCTAGAAAT TCTCAGAGTACTTTTAATTCACACTCTTCGGATGCTCATCAGTGGGATGAAAAGCTTGCATTCTGGACATCTTGCCAGCATTGTAGTACTAGGTACCAGT ACTACAAAACAATTGTAAATGCAACCGTACGCTGTCAACAATGTTCTAAATCCTTTACAGCGCGTGATATGGGGTACCAGGGTGTGCCCCCAGGATACAT GTGGACATCGCTCCATAAACAGAAAGAGGCTCCAAAGCACATGCCACCAAAAGCATCAGAAAATAATGGTGGAAAAACTTGTGGTAGAGGGCAATCAGAT AATTTTGTGCGGTCAAATCCTGTATCTATGACAAAATGCACTACTGGGGTTGGTGGGCATTGTAAAGTTGAAAAGCATAAAGATGGGTATGTGGCTTCAG GACGGACAAAGGCTGGTATTGGAACATCTAAGGTTGCTGAATCCAAACTGAAGGAATCACAAACCTTGCCAAATGCTAGAAGTAAGAGAGCAAGGCAGTC AGATTTCGATTCTAGGGATGATAACAAGGTTGAAAATGGCAATGGCTTGAAAAATGCCAATGTTCGAGAAAATGATGGTCATCCTTCGGTAAATAATGCA GGAGTGAACCAAAGAAAAGCTTCCAAGCAAAAGCAGCGTGTTCCGTGCACAGAAACTGCTCAAGATGGTGATTTCGCAAATCCTTCTAAAAGGCCACGAC AATATGAATCATTTAATGCCCCTAAAGTGGAGAAAGATAAGCATGATCATGTGCAAGTAAAGGAAGCATCCAAGTCAGATCGTGATGGTGGAAAGTCAAA GGCAGACAATTGCTCTGCAGTGAATTCAAATTTCTCTCCCCAACAAGAAATCATTTGTCCTGATCCAGACTTCAGTGATTTTGATAAGGATAAGGCAGAG GATTGTTTTGCTGCTAATCAATTCTGGGCCATTTATGATGATTCTGATAGCATGCCAAGATACTATGCTCTTGTCAGGAAAGTGTTCTCCCCTTTCAAGT TGCAGATTACTTGGTTGGAACCTGACCCAGATGATCAAGGTGAGATTAATTGGGATGATGCTGGTTTACCTGTGGGTTGTGGTAAGTTCAAACTTGGTAA TTCTCAGAGAACTGCTGATCTTGCTATGTTCTCCCATCAGATGCATTGCATAAAAGGCAGTAGCAAAGGTTCTTATTTAGTATTTCCCAAGAAAAGAGAG ACTTGGGCACTTTTCAGAGATTGGGATATTGGATGGAGTTCTAATCGAGAAATGGATTCAGAATTTCAATTTGAATATGTGGAAGTCCTATCCGATTTTG ATGAAAATGTTGGCATTGAAGTTGCGTATCTTGGCAGAGTAAAAGGGTTTGTTAGTCTTTTTCAGCAAACTGTGCACAGTGGAATTAGCTTATTGCGTGT TCCACCTAATGAGCTATATAGGTTCTCACACCGGGTTCCTTCATATAAGATGACCGGGGATGAAAGGGAAGATGTTCCAAGAGGATCTTTTGAACTTGAC CCTGCTGGCCTGCCTAGTAGCCTTTTTGTAGTTGGTGATCCTTGTGATGTGAAAATGAAGGATGCAATGCTAAACAATGGTGTTAGTTGGTCACACCATG AATCCTCTAAATGTAAAGTGGAACAGGCTATGTCGAATGAAAGTCTTCACAAAGAGAAGTTACATAAGAGTAATGATGCTGAAAGAGTATCGTCAATCCC TAGAAGATCACCAAGGTCAAACAGAAAAGGTATGGGTAATGGTCAAGTAAGCTCTAGTCAATGTGTGATTATAGATGATGATGAAGATATTGATCAGAAG GGCTGTGGTCAACCTGAGGGAACTGCTGCTGCACATACGGCTAATGAGAAGGTCAAGACACCACGGAAACAAGAGAAAAATAATTATGAAAGAGAGACAT TGAAAGTCCGAAGGTCACCTAGAGACATAAGCAAGAAAAATGCTCAAGTAGATAAAGGTGAATGCACAACAAGCAAGGTGACTGGCAATCATTCAAATGG CAACAAAAATATGAAGGAAAACAGTTTTACTCAGTCTGGAGGAAGTGTTCATACACCTTTGGCAAAAGCAGGTGAATGTGCAACAAGCAAGGTGGCTGAT AATCAGTCAAATGTCAACAAAAATGTGAAGGGCAGCAATTTTTCTAAGTCTGGAGGAAGTGTTCAATCACCTTGGAAAAAAGATTGTGATCTCGCAGAAG CATCACGGTATGACTTTAAGAAGGAAAAATCTGAAGAGAAGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAAGGATAGGATGCCTGCTGTTTA TGCTCAAATTAAGAAGATTGAATTGGCCCCTAACTTTAAGTTGCACGTGTCCCTACTTGAACCCTTCTCTTCACCAAAAGACTTCAAAAGAACAGTGTCT TGTGGCACCTTCGAAGTTAAAAAGGTCAAACCGCAAATTCTTTCTCTCTCTGAATTCTCTCATCAACTAAAAGTTGAGCCTGTGGCAAATAATTTGTATG AAATTTACCCAAGAAAAGGTGAGGTTTGGGCTCTGTACAAGGACCAGAACTATGATTTGACTTGTTCTAACCCGGGGAGAGGTGATTATCATATGGTAGA AGTATTAGCATATACTGACAAGATTATACAAGTTGTTATTCTGACGCCTGTTAGCAGCTCTCAGCCATTTTTCAGGGCTCCTAGAATCCAGAGATCAAAG GCTGGTGTAATTGAAATATTTAAAGAAGAGGTTGGTAGATTTTCTCATCAAATTCCTGCAATTCGGCACAATTTGGAAGACAATGTTCACCTCAGAGGAT GTTGGGAGCTTGATCCTGCTTCAATCCCTGGTTTTATCTGACATTGAGACCGAAGTACAGCCTTTTTTTCTCTGCTAGACTCATTTTTCATTAATTGTGG ACTTAGCATTCTCTCTCTTATGTGACTTAACTAACTTTGTATGAAGTAGCAATGCATGGAAATGTGTTTCTAGGGATATTCTTATTCTGTGTTTGGATTA AAAACGTAGTTCTTATCTTTTGCTTATGTTTGACATTGAGACATTCCATAACGATGTCTATATCATATATGATGTCCTGATTTGCTTCAATTTGATAGTT TTACACTTTTACTATATCACTCAAAGATGGTGGGTGAGCTTTACGCAATATAAGGTTGTGTGCTTAGTAATTATGATATTACATATTCAAATTCTGGAAA CAACCTTTCTCTTGTAATTTAAAGATGAAAAGGCTATGCATATCTACCTTTCCG
• Tissue: flowers
• Gene name: LI_gene_50779;
• Additional information: details;

Expression of Ll_transcript_63557

FPKM

• FPAB: 2.3
• FPNAB: 2.3
• LF1: 1.3
• LF2: 0.5
• LF3: 1.6
• LF4: 1.4
• UF1: 0.6
• UF2: 0.8
• UF3: 1.5
• UF4: 2.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_63557

• Blastp: DnaJ homolog subfamily B member 12 from Bos with 32.56% of identity
• Blastx: DnaJ homolog subfamily B member 12 from Homo with 32.56% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (533603)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423228.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;