| Id Trinity | FTRINITY_DN55384_c1_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_65514 |
| Sequence | CAGGATTGGCTTGTTGTTTATAAAGGTCATTTTTTATCAGAAAAAGCATTACAATTGATCCCATTCAAAATCCAATACCTTCACTTCCACATCACAATGA GAACTCGAAATTCCGATTCTTCCAAATCCACAACCCCTAAAAAGACACCACCGCCCCGAAAATCCGCCACTAAAACCACCGCCGCCGCCACCTCCTCCGC CGCTACCCGCCCTGCTCCGCCCAGAACGAGGCAGACGAGGAAGAAAGACGCCTCGCCCTCACTCAACCCTATCTCCGATTCCAATCCGCTTCAATCGCCT GAACAACCGAAATCATCGGGTGATGCTGCTACAACTACAAAATCTGCGAAGAAGAGGGGACCGGGGAGACCGAGAACTAAACCAGTTGCCACTCCAAACC TGGAAGAAAAATTGGAGGCAGCAGTTGATGAAACTCCAATTGTGGATAATGTTGAGGCAGATGAGAAAGTGGAAGAGCCTCAAGATGTTGAACTAGTTGA TGCACATACTATTACTAGTCAGGAGATGGGGGAACAAGGCATTTGTTCTGTTGGAAAATCTGAAGAGAAGGAACAAAAGACCATGGAAGTGGATGGAACT GTTGTCAGAAATGTTTGCGAATCAGAAGACAAGGGAGAGAACATTGTGAAAATTGAATTAACTGCTTCTCAGGATGCTGCCATTTCTTCCAAACAACCAG AGCGCAACATAGTTGACCTCAATATATCTGCGGATGGTGAAGATTCTACTGGTGCAAAGGAGGGAGAGAAAGGAACGGAAGAGTTTAATGAACAAGAGGG AGAGAAAGGAATGGAAGAGTTTAATGAACAGGAGGGAGAGAAAGGAATGGAAGAGTTTAACGAACAGGAGGGAGAGAAAGCAATCGAAGAGTTTAACGAA CAGGATGGAGAGAAAGGGATGGAAGAGTTCAAAGAACAGGAGGGAGAGAAAGGAGAGGAAGAGATTAAAGAGCAGGAGGGCGAGAAGGGAGTGGACGAGT TTAAAGAAGAGGAGGAGTTTAAAGAACAGGAGGGAGAAAAAGGAAAAGAAGAGTTGAAAGAACAGGATGTGGGGAAAGGAAAGGAAGGGCTGAAAGACGA ACAGGAGGGGGAGAAAGGAAAGGAAGAGGTGAAAGAACAGGAGGGAGAGAAAGGAAAGGAAGAATTGAAAGAAAAGGAAGAACTGAAGGAAGAGGAAACT AACATTATTGCACACAAAGAGCAATCTAGTACTGTGTCTTTTAGTGCAGGAGTGAAAGATCAATTGCAAACGGACGTTAGTCCTGAAAAGGATGTTGATG AAGTAATGAAGGGTAGTGAAAAGTTAGATCTCGGAGAACAAGATGGAGAGGACTTTATTGAGGAAGACCCTGAGGAACCTCCCGATGAACCTGAGGCATT CGAAGAGCAGCATATAGAATATGAGGCAATTGCAAAACAGCGACAAGTTAACAAAGAACATGAGATATTTGTGGGAGGGCTGGATCGTGATGCTACAGAG GAAGATCTGAGAAAGGTTTTTGAGAGGATTGGGGAGGTAGTCGAGGTCAGGTTGAACAAAAATTCTTCAACAAATAAAAATAAGGGCTATGCATTTGTGA AGTTTGCTAATAAGGAACACGCAAAAAAGGCTTTGTCAGAAATGAAGAACCCTGTTATACATGGTAAACGATGTGGCACTGCACCCTGTGAGGATAATGA CACATTATTCTTGGGAAATATTTGCAATACATGGACTAAAGAAGCTATTAAACAGAAGTTGATGGATTATGGTATTGAAGGGGTTGAAAACATTACGCTT GTCCCAGATGTTCAACATGAAGGGTTGAGCCGAGGTTTTGCATTCGTTGAGTTTTCTTGTCATACTGAGGCCATGGTTGCATACAAGAGGCTTCAAAAGC CTGATGCCATCTTTGGCCATGCTGAGCGAACTGCCAAGGTAGCCTTTGCTGAACCCATACATGAACCAGACCCGGAGACGATGGCACAGGTGAAATCTGT GTTTATTAATGGTCTACCTCCTCACTGGGATGAAGATCATGTTAGGGAACTGTTAAAATCTTATGGTGAAATTGTTAGAGTAGTACTAGCACGGAATATG TCTACAGCTAAGAGGAAGGATTATGGATTTGTTGATTTCTCTACACATGAAGCTGCTGTAGCTTGTGTTGATGGTGTAAATAAATCAGAATTGGGTGACG GGGTGTCAAAGATAAAAGTGAGAGCCAGGCTTTCAAATCCTTTGCCTAAAACACAGGCTGTAAAAGGTGGCATGTCTGGTGGGTTTAGAATTGGTCATGC TAGGACTGGAGCTCTTCCAAGACCTGGAAGGGGTTTTGGGCGTGGAAGACAGCCTTTCAACAACTGGGGAAATTTCAACAGGGATAGGAATTTCTATCGT GGTCGTGGTGGATACAGTCAATTTGGAAGAATGGGTTCTCGGGATGACCGCAATTTTAATATGCATCCAGATTTCCATCATAGGCAATTTGGAGCTGTGA GAGGTGGGCATTATCCACGTAGCCGAGGTGCTGCATTTGTCGGTCCATCTAGACATCATGATAGACCTTGGTATGGCATCCCTGATGGAGGTCCTAGGGA ACCAATTCCTATGAGAAGGCCCTACTCCCCAGGTGGGCAGTTTGACAGGCCTTTTATTGGACAGCATTTTGATGATCCATATCTCCATGATGACAATTTG CATGGGGTGAAACGTCCATTTTATATGACTGAGCCTGAACCTGATTACATGGGACCTAGTAGACTTCGACCTCGACTGGACTACGCAGATCCAGCTTTGT TACATGGAAATCGTTACCATGATCCTTTTGGGGAAGCCAGCACACAGTACCCACCTGACCATTATCATTATGGTTCAGATTATGGTGGAGGTCCATATTC ATCTTTTTATGAGGGTGATAGCTCACATGGGCATGGATACCACTATTAGCCTGAAGAACCTTTCGGTGGGATCTGGAACTGTGGAATGGACTTCTTCAAT TATGAGCATGCTGCTTGAGCATAACATTTTGAAGTCACATGTTGCTTTTGTACACTTGTTTCTTATTATATCCCTTGGGTTCTATTTATATAATCTGCTA GACCATATGTGCTATAGACTAAGTGACTTAATGTGTGGGGTAGGCTGTCTCTCAGGTCCTGGACTAAGGTATTAATTAATAAGATCTTATGTGGAGTGGA CTAGGTTTCCTTTATTTACTTTGGTACGATGGGATCATGGACCTAAGTTTGAGGATGCTTTATGTATGTACAATACAACTTTACTCATAAGTATAACTTT GATGATTGGAAAGTTTATAGGACTACTGGAAGCAAAAACTTTCACTTGATGGATTTATCTTTTGGCAATTTGATAGGCAAGTTTTGATATTTCAATATGC GTATGGAGTCTCTTATGATTCATATGAAAGTTTTGAAGAGTTAATTTTACTTTCATATTAGGAGCCATATTTTGTGATCTGGACTACTTTGGAGTTTGTT TGACTGATTAGGTGGGTTTCTTGTAAGTATTTATTGATGTCCATATGAAAGCACTCTTTTTATGACAGTCTTTATTGAATTTGCTGCAAGATAGGACCAT GGACTAAATACAGTGAAAGGTTAACCTTTATTTGAAATGATGATCATGGATGCTTTTGTGGTTATGGAGCACAGGATCAAGTTGATTGATTTGGTTCCTT ATGATACAAAGTCATTGGTAATTTGGGTATCCTTGAGTAGGTGTTCATGTTTTAAATCTTTTGATGTGCAGCACTGGCACTTGCTGAGAATAAAATATCT GTAGATATAGTGTGAAATGTCCAATGGTATGGGCATCTAAGGATGTGTGTTAATGTTTTGCTTGTCATCTATATTTTCCTTGGATGGCTTTTGAAAAAAT ACTGTCACTAAGCAAATGGATCTGTGGAGAAATATTAATCGGCTGTTTCTCTCTCTCTCTCTCTCTAATGGCTGATTATAATGAATAAGTGGTAGGTGCT AAGTGATAAGAGTGTCACTTTGGGAATAACATGGAGCGGAAGCAATTACCGATTAGTTAGGTTTGTGATAAATAGGGTGTTTCTGCTTTGTTATCAAAGG AGGGAGCTGGCCTCAAATTGGTGCTGTCCTTCTAGAATAGTTAGGATATGTAAACTGTTGAAGATGGTAGCAGTGGCTTTTTTTAATCCAATTTCAAGCA TCATGTGTTTCTGATAGTTTCACAAATTCTGATCTGAGTTTTGTTTGACACGGATAAGGCAATTATCTTTTTTATTGAAAATGTCTTGAATATGAGACCC ACATATTGGTACGTATATGTTTGTGTTTGAACAATGTTTTTTACTCTTATTTCCTTGGTTTAGGTACCTCTACCTTCTATGAGAAGGTTGGTTTAGGTTT TCAGATCAGATTAGCATCATATTCAGTCTTAGTCAGACCAAAGGCTCTATTTGTCCTTTGTTATTTAACTTAACTAGTAGGGCATTATAGTAATTACAAA TCTTTTACAAATTTATCAATTAAAAGAATCCAATTGTAGTAATTTGCACAGTAAGTCAGTAATTGCGATCTGATAGCCTACCTCATACAGAAGATCTCAA GAGACTTCTCCATTTTTTTTCTGTTTATTCAATGGATTTCATCGCAGAAAATTGCTGTATAGGTACAGAGGCAGCTAATACTTGGTATATTGGGATGAAG CATTTATCTTCATTGCATTATAACATTGGCCTGGTGTGCTCCTGTTGGCAGCATGCCAAGGCTTTGGTGAGATGCCTTCCTTCGTCAGCCGGGTTTGAGG TTTACCCGAGTGCTTATTGCCTTCCTCCATTAAAGGATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_50920; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_65514
| Blastp | Heterogeneous nuclear ribonucleoprotein Q from Arabidopsis with 34.29% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein Q from Arabidopsis with 34.29% of identity |
| Eggnog | RNA binding motif protein(ENOG410XTJ5) |
| Kegg | Link to kegg annotations (AT4G00830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423517.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |