Id Trinity | FTRINITY_DN55399_c2_g2_i5 |
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Name Transcript | Ll_transcript_63598 |
Sequence | ATTAAATACGACTATAGTATTCTAGACGAAACCATAACTTAAAAGAAAACGAGGAAAAATATACAGAGAAAACGAAAGATGAAGAAGAATCTAGCAAGGG TAGTCACAGACACAAGTTAACGCTAAACACAAACAAACAATTGAATTTGGTGCATTGAGCTGAGACGGTTACATGAACCGCGTATTTTCGTGGCGCATAA ACAAACACTATCCCATCCCAATCATATTCTATTGATCTATTCCATCATTTCCTCTTTATATGAATTCTGCAACAAACAACTTCTACTGATTGGAATAATA ATGATATAACTATAACAATAACAATAACAATGATGACCCTCACCTATTCCTTTCTACCTTCTAAACCTTCCCGTTCTCGTATTTATAACCGCCCAAGGCT CCGATTATTCACCGTTAGGGCTCAATCCGATAATATCGTATTCCAAACCCTCACTCAATTCCATTCCTTCAATCTCATCGCTCCCGTTCTCGCCTTCGCT TCCGGTTTCGCTCTTTCCCTCTCTCGCCGCCGCACCACCACCACCACCACCACCAACTCGGAGTTAATTGATCTCGGCGACTGGATCCTCTTCGCTAATC CTTCGCCGTTTAACCGTTTCGTTCTTCTTCGCTGTCCTACCATCTCGTTTCGCGACGAGGATGCCAACGAGAGGCTCGTGAGGGAGGAGAAGCATTACGT CACTGTTAACAACGGAAGGATTCGTCTGAAATTGGATTATGAGAGTGATCGAAAGGTGAGTTATCAGAGAGTGTGTGTCAGTTGTGGTGATGGTGGTGTG GTTTCATTGGATTGGCCTATTAACTTGGATTTGGAACAAGAGCATGGTTTGGATTCTACTCTCTTGCTTGTTCCTGGTACTCCTCAAGGGAGCATGGATC CAACTGTCATGTCCTTCGTGGTTGAAGCTCTCAACAAGGGGTTCTTCCCTATTGTTATGAACCCTAGAGGATGTGCTGCTTCACCTCTCACCACTCCCAG GTTATTTACAGCTGCTGACAGCGATGATATCTGCACAGCGGTAACATATATCCGCAAAGCGAGACCCTGGACAACGTTGATGGGTGTTGGATGGGGATAC GGTGCTAATATGCTCACAAAATACCTGGCAGAGGTTGGGGAAACTACACCGCTCACAGCTGCCACATGTATAGACAATCCTTTTGATTTAGATGAGGCTA CAAGGTCTTCTCCTTATCACATTGTTACTGATCAAAAACTCACTGATGGACTGAAAGATATTCTACAAGCCAATAAGGCACTATTCCAAGGCAAAACAAA AGGTTTTAATGTGGAAAAGGCTCTGTTAGCTAATTCTGTCCGTGAATTTGAAGAAGCAATATCTATGGTATCTTATGGCTTTGAGGATATAGAAGGTTTT TATTCAAAATCCAGCACAAGAAATGTAATCAAAGATGTTAAAATTCCTGTTCTTTTTATACAGAGTGATAACGCGATGGTTCCAGTTTTCTCAGTTCCAC GCAATCTGATTGCGGAAAATCCTTTCACAAGCCTGCTCCTGTCTTCTTGTTTACCAGCTTCTGTTATTGAAACTGACACTGACATGTCTGCTATATCATG GTGCCAGCTTTTAACAATTGAGTGGCTCACAGCAGTTGAGCTGGGACTCTTAAAAGGTCGTCATCCTCTTCTGACAGATATAGATGTTACTATAAATCCT TCTAACGGGTTAACTGTTGTCGAGGAAATGAGGTCAGCTAAGAATGTTAAAGTCAGCAATTTATTAGATCTTACTCGGTCAGATGCATCTAATGGATACA CCACTGATCCTACCAATGAATTCCTTGAAGAAAGGAAGAATGATGACAACAGTCATTTTAGGTCCAAACAAGATTTACAAAAGAACCTCCAGCGTGAAAA TATGAGCTTGCAAGTAAAAGATGGTCCTTCACAGCAGACTAGCTCCATCAATGCAGATTTAGTTGAAGAGAATGTAGGTCCAGCAGATAATGAACATGGT CACGTTTTACAGACAGCAAAATTGGTAACAAATATGCTTGATGTTACCATGCCTGGTACTTTAACAGAAGAGCAGAAGAAAAAGGTATTAACTGCTGTGG GTCAAGGAGAGACACTCATGAAAGCTTTAGAAGATGCTGTGCCAGAAGATGTTCGTGGAAAGTTAACAGACGCTGTCACTGGAATTTTGCATGCACGGGG AGCTGACTTGAAGTTTGATCGGGTTTTTGGTGTATCTCAAGGTCCGGAAGGATTAACCGGGCAAAAGAACCAAGAAAATTTCAGAGTATCAGGTGTGATT GGAGACCTGTCCTCTATGAATCAGATGAAAAAGACTAGTAGTTTTGTAGATGGTTCTAATAATGCTCCAAGTGACAGGGTTGGGCCTGCTGAAGAAACAG AAACAGATGTTATTCCCGTGGACAAATTGCCAAATTCCACAAGTTTAGCCCAATCTCAAGAATCAAACAATGAAGTTGGTTCTTCTAATTCTTTCTGGAG TGAAACTGGCAATTCTGGTGACAATATTGACACAGACGTGGAGTTAAAAGAAAAAGGCGTTCCTGATATTGATCATATTGAGAAGGATGTGGAAACAGGT TCTAAGCCATATACTCCCAGAACCAGCCATTCTGATGGGGTAGGTGGCGAAGAAGCAGCTGTTGCTGAACAGAAGAACCAAAACAATGAAATAGGTCAAT CAAACACAATGGAGGAAAATAATATCCAGAAGGTTGAACAGAAAAGTCAGGCCTCTTTTAGTGATCAAAGTAAAGTAGCATCAACTGATGAAAAAGATAA TATGTCTTCTTCTCCGATGCCCTCTGAAAATGAAATAGTTCAATCAGACACAAAGGAGGAAGATAATGTCCAGAAGGTTGAGAAGAAAAGTCAGGACTTC TCTAGTGATCAAAGTAAAACGACGACAAGTGATGCAAAAGAACTGTCATCATCTCCCATGCCCTCTGAGCACCATACAATAGAAGGGGAAAGTAATGATA ATGAGAAGAAAGATAGCATAAATACACAGCAATCTAACTCTACTAATTCTAATTCCAGTGCTGCCACCTTTAATGTTTCTCAAGCGTTGAATGCCTTTAC AGGGATGGATGATTCCACCCAAGTAGCTGTAAATAGTGTTTATGGTGTGTTGGAAAATATGCTATCTCAGCTTGAGCAGAGCTCAGTCAATGAAGGTGAA GTCAAGGACGGAAAAGATGTTGAACATAGCTCAGTCAATGAAGGTCAAGTCAAGGATGGAAAAGTTGTTGAACATAGCTCAGTCAATGATGGTCAAGTCA GGGATGGAAAAGATGTTGAAAGTAAGTTAGATGAACACCAAAAAAGTAATAGCCAAAGCATGGATTCCAACCTATCTGATGATCTTCGTGGAGATGATCA ACAAAATGGCATTTACTTGAAGAATGATTGTTGTCATACAGAGGAACAACTACCCCATAGCCTCAACACAATTAATGGGAGCAGTTTGTTCAGTCCTCAA AATAGTAACTCTAAAGACCACTTAGTTCAAAACGAAAATACAGCTAGCGAAGTGGTTGACAAAACATATCTTGTTCATGAATGGGATGAAAACAGACACG CAAATAAGATTCCACCGTACTTAGCTTTGGGTTCATATAGGGACTCTCTTTACAACGACTACATCCGTAAAAATCTTGTTTCAAAGATTTCTACCAAACC ACTGGACCTACACACAACTACTACATTATTGCTTGACTATTTCCCTGAAGAAGGCCAATGGAAGCTTTTTGAACAACCACAAAACATGGAAATTGTTTCT GGCAGTACTGCAACTAGTGATGAGGCAGGGTGCAAGATGAAGACCCACTCATCTACAAAATCTTCTGATGTTAAGCAATATATTGGACCACCATATGTAA TATTAGATACTGAAAATCAACAGGAACATGTTAAAGAGTTTATTACAACAGACACTAAATACAAAATGATTGATACTAGTGATGACAGGTCTAAGGAGTT GATCCAATTTGTGAAAGTGGTAGTATTAGGTTCTTTGAAGATGGAAGTTGGTCGTAAGTTGAATGCATCAGAAATTAAAATGATGAAGCCAAGGCTAGCT GGAGATCTGGAACATGTGGCAAATGTGATATCACTGGCTGTAGTGCATAGCAATGTTATACAACTACATACTGAAAGTCAAGTTCGTAATGTTGAGGATA CTGTGGAAAAAGTTGGTACTCTTGATGGGGAGTATCTCATTAGAGTAATTACAGCCTCTGTTCAGGAAACACCCTACCTGACAAGGGTGATGCCTGTTGG TGTTATTGTAGGGTCCATCTTAGCTGCATTGATGAAATATTTTAATGTTGCTACGCTCGAAGATAATAGTCATAGAGGATATGTGACCTCTGGTGATGGG GGGAAATCTAGCAAGAAGTATTATGGCCATGTTGGTGTAAGAGAGATGGATCAAGTACCTAGAGGAAAAAGTAGTTTGGACCATCCAATCAAGAGGGAGG CTGCAGAAAGAGTACCTCTGACCCGTGATGATGGTGTAAAACCTGGCAAAATGGATTATGGCCATGTTGGTGTAACAGATATAGATCAAGTACATGAAGA GAAAACTAGTTTTGACCATCCCATCAAGACAGAGGAGGTAGAAAGTGAATCAGAATATGGAATAAAAAATACTGCCATGGTTGGCACTGTTACAGCTGCT CTTGGGGCTTCTGCTTTATTCATGCAAAAGGGTCCACAACAAGGAAATGAAACTGATGAAATCTCATCAACATCTTTGGAAATGAATGACCACCATCAAA AGAAGCCAGAAAAGCTTGAGGTGGAAGTCTCTGAGAAGAACCAGCATAACATAGTCACAAGCCTTGCTGAGAAAGCCATGTCAGTTGCTGCTCCAGTTGT ACCTACCAAAGATGGCGAAGTGGATCAAGAAAGACTGGTTGCGATGCTGGCTAATTTTGGACAGAGAGGTGGCTTGTTGAGGCTAGTTGGAAAGATTGCT TTGCTATGGGGTGGTATACGTGGTGCAATGAGTTTGACTGACAAGCTTATCTCATTCTTGCATATAGCTGAACGACCCTTGTTTCAGAGGATTCTTGGAT TTGTTGGTATGGTCCTTGTTCTATGGTCTCCTGTTGTTGTTCCATTGCTTCCAACATTGGTCCAGAGCTGGACAACAACGACTCCTTCCATAATTGCTGA GTTTGCTTGCATTATTGGCTTGTATGCTGCTATAATGATACTTGTTATGTTATGGGGGAAAAGAGTCCATGGGTATGAAAATTCGTATGAGCAGTATGGT CTGGTTTTGACTTCATCACGAAAGCTATTTGAATTTTTGAAAGGCTTGGTTGGTGGAGTCATCCTTGTTTTCTCAATCCATGCTGTGAATGCATTTCTTG GTTGTATAAGTTTCTCTTGGCCTCTTAATCAAACTTCTGTGGATGCCATGACTTTGCTCAAAGTTTATGGACAAATGGGTCTGATGGTGGTTCAAGGAAC TGTAATGGCAAGTGCAATTGCACTAGTGGAAGAATTGCTTTTCAGGTCATGGTTGCCACAAGAAATTGCAGTTGATCTTGGATATCATCATGGAATTATC ATATCAGGGCTAGCATTTGCTTTATCACAGAGGTCTCTACAAGCAATACCAGGACTTTGGCTTTTATCTTTATTTCTGTCAGGTGTCCGACACAGAAATG GAGGTAGCCTCGCCATGCCAATGGGCTTACGTGCAGGGATAATGGCATCTAGTTTTATCTTGCACAAGGGTAGATTTTTAACATATAATAATTATAATGC CAACTTTACTTTCTGGATAACCGGGAGTCATCCATTCCAACCATTTAGTGGTTTAGTTGGTTTGCTATTTTCTTTATCACTGGCCATACTTCTCTACCCC AGACACACTTCACAAAAAAGAGAAGCTTAGATTTAAGTAGAAAATTCATCAGACAAAAACACTACACTTATAAATTTGGTGATGCCTTCCTGATAATTAG GCAGAATTGGAAGCAAATGGTGAGGCATTTCGGTTCTACTTATACACAGTCCAGTTTTTATTGTGCTGTTAATTGGGGAGTGGAGAATGGGAAAGACAGA TATTGAAGGGCATAGAAAGATAAAACTTAGGAAAATTAAGGGCTTCAGTTCTCCAACTTAGATACTAAAATTTCATCTGGAGCCTAAGAGGCAGGCATCA ATCATGGTGTGAGTATGTACTATGTACAAATTCAATTTTGCAAGTAGAAAAGCTAGACGCTTGTACAAAGTTTTGTTTTGTTTTTGTAGTCATTAAGTTA TGCTACCTGTGTCACTAATTAACAGAAAAGATGTAATGCAGTAGCTAGGATATAGGAATAGAGCCATAGGTCATATATAGTTGTGTTCTATTAGTAGGAA ATAAATTTTAATTGTTGTCGTTTTCTAGAGCCATGTTTACATTGTAAATTCGTAATACTAAACCGCAGTCTCTTATATTATGTAAAGCAATGGGAATCCG TTACTTCATATTGTATGTTCATCTCTCCCGTCTGGTTATATACTGGTGGCAATATCTTCTGCATCAGCTTGCCTGTAAGGAGAGGACTCGTAAAGGATAA TTCGTCACCTGGAATTTTGGTGCGGATTTTTTTTTTACTATATAGTTATTCAGAGGGTGTGATCTCAACTTTTATATATAACAAAATGATTATAAAAATA TCAAATGTAAATTAGTTATTTTAGCACTTTTATTACTTAAATACTTATATTTACGATCTTTGAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_51076; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_63598
Blastp | Embryogenesis-associated protein EMB8 from Picea with 30.7% of identity |
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Blastx | Embryogenesis-associated protein EMB8 from Picea with 31.72% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443624.1) |
Pfam | CAAX protease self-immunity (PF02517.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |