Id Trinity | FTRINITY_DN55413_c1_g2_i2 |
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Name Transcript | Ll_transcript_111087 |
Sequence | GGTATTGTATGAGTGTATTGCTTCTTCTCTTTCTGTCTTTGGTCCAACACCAACACCCAACCCCAACCCACGACAACAACATAGAACGGTGCCGCCTTAC TTCACCATCTCTCCAAAATCTAACGTTAATTTCCACTCAAACAATCCAAACCCATCTCATCATTTGGCCCATAAACCCCGTTCTATATTCCATTCCCCAT CTCAGATCCAAACATTCAAACACTCTCTCGTGTTCTTCATTTTCATGAATTGGAATGCGAGTTTTCCTTAATTGTCAAAGCCAGCGTTAGATTTTGAAGA AACAACGAAAGATGGTTGGAGGAAGAGTTGTGAAAGTGAAGAGAGATACGCTACGAGCATGCATGACATGCCCTCTTTGTCATAAACTCTTCAAATATCC TACTACTATCTCTCTCTGTCTTCATACCTGTTTGTTTCTCTTTCTCACTTCTTTTTTATCTCTTTTCTCAATTGGGTTTTCATCTTTCTTCTTTTCTCTT TCACATTTTCACGTCCAATTAGTTACATCCATTTTTTAGTGATTTGGTATTTCAGTTTTCAGTTTAATTCCTCTATTCTTTCTTGTCACTGTGTTGGGTG ATTCATGATTTGCATTTTCTGTCCCTGTTCCTACCAAAAAAATAATCTTTCTATTCAACATGTTACAGGACTCTGGTCTTAATTATATTTTGATATAAGG ATTTTGTGACTTTTTTGTTACCATGATAAGAATGTTCAACTGTTTTTTTTTGTTACAGTACGTGGAGCAATACAAGTACTTTCCTTTTATGTGATTTATT GGTTGTTTTGATTTATGTGATTCTGTCTTATTTCATTTTGCTGCCATAGTTTAGACTATAGTTATGGAGCTTATTTTGGTCTTGCCCATTTAAGGTGGTA CACTGTGTTATGGAATTTCTTAAGGAAGTGCAGATGTAGTTGAATTTCATGTTTATTTTATAATACTGCTATCACATTATATTTACTTGTTGCATTCTTG AATTATACACATATACAATGTATTGAGCAATGAATCCGGAACCAGTTTGCAGGAAGTGCATATACGAGAAATTCTCGGATGACGAGGTGGATTGCTGTCC AGTGTGCAACATTGATCTGGGCTGCCTTCCAGCGGAAAAACTCAGGCCAGACCATAATTTGCAAGACATAAGGGCAAAAATATTCCCTTTTAAAAAGAAA AATATTAAGACTCCAGAAGTTTTGTCTTCAATATCCCTGCCTGCAAAGAGGAAGGAAAGGTCGCTCTCATCATTGGTGGTTAGTGCTCCGAAAGTTTCGA TGCAAAGTGGCTTTACTGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTACTGCTTTACGTGGATGCAGTTTTATTCTTGAAGAAACCATAAAGAAGGA AGCAACGTGTGAAGATAATATGGATTCTTCTGTGGCTGAACCTTCTAAAAAACATAAGCCTGGTGAAGATATAGAGGACAGTGTAGAACTTACAGAAGGG AAGGCTGATTTATGGACACCATTGAACTGTCTTGTTGAAGCTGCCAATAGAACAAAGTCCTATAGGTCAAATTCACATGCAACTCCTTCTTCCAAACTAG ATTCTCCAACTACCCCTTGTGGTGATGTTGATATGTCTACAAATGCAAACAAACCGGAGCTACCGGCTTCTGTCCAGAGTGAATTAAGCATTTCTAAAAC CAAAAATAAGGATAACGGACATAAAACAAAATTTGGAGATGACAAGGATGGAAGCAGCTTGCCCTCAAGACCAGTGAAGCGAAAGAGGTTGCGTCCTGCC GGCCAGAAAAGAGTTGAAGCATCTGAGATGTCTGCGTCAGCCCAAGTCGTGCTAGATGCTTCAAATGGAAAATACAACAGAAAAAACAGTCCCATTTGGT TTTCATTAGTTGCTTCAGACGACCAGTAAGTTAGTTTTTTATATGAAAAAATCGTAGTAATCAAAAGGTGCCGATCTTCCGTTAACCTTGAAGAAATGGA TGTTATCATGCAGGAAAGGAGATTTTCCACTGCCACAGATCTCAGCATGTTACTTGAGAATAAAGTAATTCTTCTGAATCTCATTTTCATTCTGTTTATT TGGTTTATTTTTAAGTGAGTACAACTTTGGCCTATGAGTTGAACATAATGTAGTAACTTTTCTCATTTATTGTGTAAAAATAATTGTAATAAGATACGAA TAATGTTTTTACTATTCACATGTTCTCTCAGTATTTCCTAAACTGAAACCTACGAGAAGAAAAGTTACTGTATATGAAGGTACAACTCCCCATATTTTTG AACAATTTTCTGAGAGCAGTCATAAAATCAGAAAAGAGCATATTGATGTTCATTATCTAATTCATTACTTGATTTTGTTTTGCTATGATCATTGTCTAAT TCCCCAGACCCTACTAAGTGGGAACCTCGTGTATTGGGCCGACATTTTTTTATGTTATTCTAGATGGAAAATGCACACTGATGATCATTGTCCGAGCCAC AGTTTAGCAAAGGAGAACTTAACTTCCATATTGAATAATTTGAAATGAGTTGATTTTTCCTGCCTTTTTCTTTCTATTGTTGCATGCCCTTTTTGTTTCC GGTTTCCTTTTTCTTCTACTTTTATTGAGTACAATCCCTTTTTTCATGATAAGTATATGTAGGTCATACATAATTGTGTAATTCTTTGTTCTGTACCTCG TCACAGGGATGGCACTGTACCTGTCTCGTTTATTCAAAAGTACCTTGTTAAGAAACTTAATCTGGCCAATGAAGCAGAGGTGAGTTCATTATATATCACT GTCTTCTAAGAACTATGAATGATTGAAACATCCTCTCTCTCTCTTCAATGATTTCTCTCGCTAAATTTGGTTGAAGACTGTAGAGCCTGTAGTTATAGTA AGGGTGTGTGGTCCTAAACTATTTACTAATTAAGGTGTGTCTTTTATTGTTATTAGTGAAACATTGCTACAGTAGGCCAAGCAACATAGTGCAAATTTTT TGGACAGTGTCTGAGGTTATCATAAGGTCCTATGGAAGTTAGAATTTAGGGTCTGTGTGAGAGTTGTATTATAGTTTTATAATTCCTACAGAATAGTAGT ATAGTACAAATCCAGCACTACTAATGAGTACAGAAATAGAGTTCCCGACCTCTGCGACATGCACATGCAACTAGGAACTACTTAAAGAAACCTCATGTTT TGAAAAAATTATGTAAACAGTCTTATGATTTTCAGGACTGTGACTTGAAAAAATTATGAAATTTTCTTTTACATAATAAAAAATTGGCTGGTGCATTGTT TGGTGCTGTTTTGTACAGGTGGAAATAATGTGCCGTGGTCAGCCAGTTCTCCCATCTCTGCAACTGCATAA BLAST |
Tissue | flowers |
Gene name | LI_gene_51215; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_111087
Blastp | E3 ubiquitin protein ligase DRIP2 from Arabidopsis with 39.94% of identity |
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Blastx | E3 ubiquitin protein ligase DRIP1 from Arabidopsis with 37.82% of identity |
Eggnog | Polycomb group ring finger(ENOG410XPCN) |
Kegg | Link to kegg annotations (AT2G30580) |
CantataDB | Link to cantataDB annotations (CNT0002431) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453411.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |