| Id Trinity | FTRINITY_DN55413_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_111092 |
| Sequence | GGTATTGTATGAGTGTATTGCTTCTTCTCTTTCTGTCTTTGGTCCAACACCAACACCCAACCCCAACCCACGACAACAACATAGAACGGTGCCGCCTTAC TTCACCATCTCTCCAAAATCTAACGTTAATTTCCACTCAAACAATCCAAACCCATCTCATCATTTGGCCCATAAACCCCGTTCTATATTCCATTCCCCAT CTCAGATCCAAACATTCAAACACTCTCTCGTGTTCTTCATTTTCATGAATTGGAATGCGAGTTTTCCTTAATTGTCAAAGCCAGCGTTAGATTTTGAAGA AACAACGAAAGATGGTTGGAGGAAGAGTTGTGAAAGTGAAGAGAGATACGCTACGAGCATGCATGACATGCCCTCTTTGTCATAAACTCTTCAAATATCC TACTACTATCTCTCTCTGTCTTCATACCTTTTGCAGGAAGTGCATATACGAGAAATTCTCGGATGACGAGGTGGATTGCTGTCCAGTGTGCAACATTGAT CTGGGCTGCCTTCCAGCGGAAAAACTCAGGCCAGACCATAATTTGCAAGACATAAGGGCAAAAATATTCCCTTTTAAAAAGAAAAATATTAAGACTCCAG AAGTTTTGTCTTCAATATCCCTGCCTGCAAAGAGGAAGGAAAGGTCGCTCTCATCATTGGTGGTTAGTGCTCCGAAAGTTTCGATGCAAAGTGGCTTTAC TGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTACTGCTTTACGTGGATGCAGTTTTATTCTTGAAGAAACCATAAAGAAGGAAGCAACGTGTGAAGAT AATATGGATTCTTCTGTGGCTGAACCTTCTAAAAAACATAAGCCTGGTGAAGATATAGAGGACAGTGTAGAACTTACAGAAGGGAAGGCTGATTTATGGA CACCATTGAACTGTCTTGTTGAAGCTGCCAATAGAACAAAGTCCTATAGGTCAAATTCACATGCAACTCCTTCTTCCAAACTAGATTCTCCAACTACCCC TTGTGGTGATGTTGATATGTCTACAAATGCAAACAAACCGGAGCTACCGGCTTCTGTCCAGAGTGAATTAAGCATTTCTAAAACCAAAAATAAGGATAAC GGACATAAAACAAAATTTGGAGATGACAAGGATGGAAGCAGCTTGCCCTCAAGACCAGTGAAGCGAAAGAGGTTGCGTCCTGCCGGCCAGAAAAGAGTTG AAGCATCTGAGATGTCTGCGTCAGCCCAAGTCGTGCTAGATGCTTCAAATGGAAAATACAACAGAAAAAACAGTCCCATTTGGTTTTCATTAGTTGCTTC AGACGACCAGTAAGTTAGTTTTTTATATGAAAAAATCGTAGTAATCAAAAGGTGCCGATCTTCCGTTAACCTTGAAGAAATGGATGTTATCATGCAGGAA AGGAGATTTTCCACTGCCACAGATCTCAGCATGTTACTTGAGAATAAAGTAATTCTTCTGAATCTCATTTTCATTCTGTTTATTTGGTTTATTTTTAAGT GAGTACAACTTTGGCCTATGAGTTGAACATAATGTAGTAACTTTTCTCATTTATTGTGTAAAAATAATTGTAATAAGATACGAATAATGTTTTTACTATT CACATGTTCTCTCAGTATTTCCTAAACTGAAACCTACGAGAAGAAAAGTTACTGTATATGAAGGTACAACTCCCCATATTTTTGAACAATTTTCTGAGAG CAGTCATAAAATCAGAAAAGAGCATATTGATGTTCATTATCTAATTCATTACTTGATTTTGTTTTGCTATGATCATTGTCTAATTCCCCAGACCCTACTA AGTGGGAACCTCGTGTATTGGGCCGACATTTTTTTATGTTATTCTAGATGGAAAATGCACACTGATGATCATTGTCCGAGCCACAGTTTAGCAAAGGAGA ACTTAACTTCCATATTGAATAATTTGAAATGAGTTGATTTTTCCTGCCTTTTTCTTTCTATTGTTGCATGCCCTTTTTGTTTCCGGTTTCCTTTTTCTTC TACTTTTATTGAGTACAATCCCTTTTTTCATGATAAGTATATGTAGGTCATACATAATTGTGTAATTCTTTGTTCTGTACCTCGTCACAGGGATGGCACT GTACCTGTCTCGTTTATTCAAAAGTACCTTGTTAAGAAACTTAATCTGGCCAATGAAGCAGAGGTGGAAATAATGTGCCGTGGTCAGCCAGTTCTCCCAT CTCTGCAACTGCATAACTTAGTAGATCTATGGTTCCGGGCTGCATCAACCTCAAAAAAGATACCGGCATCCGTGGGGTCCTCGGCTAAGGATTTTGTGAT GGTTTTATCATATTGTAGAAAGCCCTTGCCTACTTGAGAATCTGAGATTGTCCCCTATTACATTTACATCATTTTATCCTCAATACTTTACATACATGTT CAACTTGTTTTTATAACATTGTCACTGAGATTCCTGCATAGGAATGTGTTCATTTAATTCCTAACATTTGATGAATCTATTTGAGTTTGTTTTGCTAATG ACCTGAAAACGTGCACCCTCCAATTTTATTGCATCTGCTTTGTCTGTTGTTATTCTTAGGATCATGGAACATTTGATATTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51215; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_111092
| Blastp | E3 ubiquitin protein ligase DRIP2 from Arabidopsis with 43.18% of identity |
|---|---|
| Blastx | E3 ubiquitin protein ligase DRIP2 from Arabidopsis with 39.88% of identity |
| Eggnog | Polycomb group ring finger(ENOG410XPCN) |
| Kegg | Link to kegg annotations (AT2G30580) |
| CantataDB | Link to cantataDB annotations (CNT0002431) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453410.1) |
| Pfam | RING-type zinc-finger (PF13445.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |