| Id Trinity | FTRINITY_DN55433_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_112620 |
| Sequence | AAGAACTGAAGATGTTATCAACTTATGAAAAAATCTATTTTACATAAGAAGATAAAAAAAGAAAAAAATAATCTACCAGAAAAATTAAAGAAAATCAGAT AATTTGAAAAGGGTAACAGAAGAAAGAGAAAGAAAACCCAGGATGCAGAATATCTGAGTTTTTGTTGCCATAAATGTAAGAAAAGTTGAGGGAAATTTAG AGAATTGGTGAAGTTTCCATTGCAATGAACAAAACATAAAACAATCGTTTCATTAGTATCTCCGACATGGGTTCAGGTTCTAGTAGAGTTGGGTCTCCTC AATCATCTACACCCAGAGACAGGTTCAACCACACCCCTCGTTCTACAACTTCCTCTTTTCTCCGCGGTTCCTCCACCTATCAGGTGGAAGAACATCCATC TGAACCTCAGGTAGATCCAGCAATAGAGTTTGATAATGAAATGTATAAAGTCACTGAGGAATCATCTTTATTGTGTACAGAAGCTAGAACTAGCCGCAGT ACCCGTGCTGAAACTGCCACCTCATCTGATACCAGAACTGAGTTCTGTGGAAATGCTACTGTTGAAGGTTCTTCCAGAAATGTTGCAGCAGCTAGTCAGA CGAAGTGTTTATCTGAATTCGAAGAGCTAGTCCCACCTTATCAGGTAAATGCTGGTCATAATCACCATGAATCATATAGGGATATTAGCAACACAGCTAG TACTTCATCTGTAGAACAGCAATCTTCAGATCCAGTCTCTGTGAATGTTTCTTCTAACGAAGATGTAGTCAATGCTGTTGATGATCCAGTGGTTAGTGGT GGCTCTCAAATCTCTCGCGAGACAGTGCATCCAAGGAATTCCACCCCTCAAGAGCATGGAAATTCAAGTTCTGGTGAAATCTCTGTTGAGAATCACACAA GTGCTTTCATAGCTACCCGTGATTCTTCCAGTCCTGTTGCTCAAGCTTCAAACTTACCAGAAAATTCTCAACTACCAGAAGAAGAATCACGTCAGGAGAC GATCCCTTCAGGTTTAGGTATTCTTGTGTCCAATCGGGAAAGAGGCCAGGGAAGTGATGGTGTGCTTCAAGTTGATGTGGTCGCAATATCTTCCAGCATG TTGTCTGGCAGCAATGCTGATGTCGATGATCATGATGTCAGAAGGAGTGGTAGAAGATTATTCTGGGATGCCTTTTCACGACGTAGTTCTAGAGGGCTTG GTGATTCTACGACAATGATCTTCTCTGCTGGTGGTGCCGATGATCCAGAATCTCGGGATCGATGGCTTGTTGATTTTGGTGGTGATTTCTCAAATAATAG GGTTCGAGGTCCTTCTGGCTATATGGGCAGTAGAATTCACAGATTGAATGGACGAATGCGGCACTCAAGATCTGAGATATGGGAAAGGCTTCGTGGCGGC CTTGATGAGATTGGTCAATTAAATTCTTCCTGTCCACTAGGACTCCATGCAGATGGTATGTGCTCATGTGACTCTTCCCCAATAGCTGAGGAATCTAGCA CTCGAGCAAGTATTTATAGAATAGTCATGCTAGCAGAGGCTCTGTTTGAGGTTTTAGCTTTAAACCTCTGCTTGAATTTTATAATTTCTGTTTGCTCCTA GATTCGATTTATTCTGGATTTCCTTCGTTGTCTAATGCTTTTCTTAAATACTGAAGTTCTATGCATCGTAATTTTGTTCTTATCACACTAAAAATATTGC TTAATATTTCCGGCATTTATTGCTTTATATCTAACTAGGATGCAATTGCGGGGTAGAGTGCTTACTTGATAAGTTATTTCAGTGTGGATCGTCCTTCGAT TTTGTTACCATTTAAGCCTCTTTCTCCATAATCAATTCTATTGATAATTAAGATTATCTGATATTGGATTTAATAATTTAGTGAGGCTTATCCCATCTAC GGAGGAAAACAATTCTCATTCCTTATGTAGACCTGAAAATGTTTTGTAGTGCTAGGATGTTATCTACTGTTTGTTTATTAAATGTGCATCCTTTCGATCT AGCTTTGCGCTGGAGACTTTTCAGGATAGGGTGTGCACTTCTCCCAATCCTCTAAATTAAGTATGGATACAATGAAATCTCCAATAAAATAAATTCTCTG AGTAATTTAGAATGCAAATATGTACCATAGTATTAAATATCCCTGAGTTAAGTACTGAACCCAACAAATATGCTTGAGTTTATGCAATCATGAATAGAAA ACTTGATTGGGTATATCAAAATACTCATCCCTGTAAGGATGTCTTACTTTCTGAACCTTCTCCCTCCTTTTTGTTTGTCAGTATTTGTTTGTAATCATTT CTTTACATTTACTTATCCATAATATATATGTGCATTCACCTGATAATTTAAGTTTCTGGAGTTGATTCATGACATGGAATCAGAGCCTCTATGACCAAGT GGTTAGTGTTTGATCTTTGGGGCTCTCATTCTTCTAAATAAAAACCTACAAGTTGAATTTCACAAAATGGTGAAGAGGGGCCTGTGTTGTCCACCTTCTT TTTTTATAAGAGAAAACGCATTGAAGGAGCAGAAGGGTGGTGCTTATCCCATTTACCTTCAAGGGCATTCAGAGAATCACCGCCCAGCCCCAAATACGTT GTACAGAACGGACCTTAATGATCTGCAACCTTAAATATTTATACAACCAGACACCAAAAAAAAAAAAAAAATCCCCTCCTCAGATCTTGTAGCAGGTTAT AGCTACGTAATCATGAGAACTCTACTTTAGATAGTATTGTCTACAGATTACACTTTACACTTCATGCCGAAAAGGGCTCTTGCATGATTAGGCGAGTTAG AGATATAATAAAATCAACGACGTGCCTTCATCTAACAACTAAAATGTTTCTAAGAGATAGTTTATGACAGTGCCTTTAATGGAAAACTAATATGTTGTAA TTGAAGGCTGCTCAGGTCTTAAATTTGCATTAGCCATGTGATATATTGTTAGGTACAACAGTTTTGTGCATAAAAAACTACTTTGCATATATACTGTTTT GATTACATAAAATTTGCCCCTTTAGGTATATTTGACCGAAAATGGTTCTATACTTTCCTTCAACTCTTGTTTTTTTATTGGATAAAACCTACATTTTTTT GCAATTGGACTAACCAAAACCAATTTACCTGGAACTTATTTTTCGTCTGCAGGTTTTAGATGAAATCCATCGGCAACCTGTATCACTTTCCCTATCCATG GTCTCACTCCCTGCACCTGAATCAATTGTTGACTCTTTCCCTCTGAAGTCTCACAAGAAGGTTGATGCAGCTAATGGCAGCAATGACACTGAACAGTGAG CCTCTTTTTTTTTTCCGCTTATTTAGCAGCTGAAAGTTTTTCTTCTTTCCCAAGAAAAAATAATGATCAATTTTATAGATGTTACATATGCCTGGCGGAG TACGAAGAAGGGGACCAAATACGAATTCTTCCTTGCAACCATGAATATCACATGATGTGTGTTGATAAGTGGCTTAAAGAAATACATGGTGTATGCCCTC TTTGTCGTAGCAATGTTTGTGGAGGATTAACGGAGTCTGCTGCCGACTCAGAAATGCCAACTCATTGATATTGTACACATGAATGTAAATATCCATTTCT TCAAATATATTTTATCCCTTGCCATGTTGCATATAAAACAGCTTTTTAGAGTCCAATGTACAAAGTAAGATTTCGTATCCGAATCTTGTAATGCTTCCAA ACAGTTACAGATTTTTGATTCTGTCATAATCCATGTCATGACCATCTTGTGGCATTGCTGTTGTTTGGGTAGTTAGGTTGTTGAAATTGTATGTGTTCTG TAATCCTCGGGCATGGTTGTGGCATTGCCATGTTTGGGGAATTAGGTAGTCAAAATTGCTTGTGTTCTCAAATCTATGTTGTTACACTAGTTCTTGTCTC AGCGCAGTTCACACTATTGTGACCAACTGCTGTTGCATATCAGAAAAAACAAATCATAATTATGTCTTTTGAAATTTGTTTAAGCGGGTGCGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51377; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_112620
| Blastp | - |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RNF13 from Gallus with 47.76% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441071.1) |
| Pfam | - |
| Rfam | - |
| GO | - |