Ll_transcript_112626

• Id Trinity: FTRINITY_DN55433_c3_g1_i9
• Name Transcript: Ll_transcript_112626
• Sequence: AAAAGAGAGTGTGAAGAGAGGAAGGAAAAAAGAAGAAGAGTGAGTGGGTAAAAGTGTAATTAAACAAATAAAAATGTGTATTTTATATTTTTATGTAAGA AGAAGAAGAAGAAGAGAGAGAAACTCAATTATTTTGAAAAGAGAAAGAAAAGTATGGATGAGTATGTTTGAGTTTGTTGCCACAAATGTAAGAAAAGTTG AGCCAATTTTTCTGTAGTTTGTTGAGCTTTCCATTGCGATCAACAAAACATAACATCTCACTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTCTTTTT TCTTCATGGGTTCAGGGTCTAGTAGACTTGGGTCTCGTCAATCATCTACTTCAAGGGATAGGGTTAACCGAAACCCTCGCTTTAATGTTTCTTCTCTTCT TCTCTGCGGTTCCTCCACCTCACGCGCCACCTATCAGGTACCTAACCCTCTTACCCTTTCACAATTCTATAATTCCTTTCATACCCATTTCGTTTTTCTC ATTTATCATCACTTCTTTTATTCAAATTTTCATTCTTTTTCACATCTCTGTTTCATCAACCCGATCCCCATTTTTATTCATTCAAAGCATCTCTAGGTTG TTTTTGTTTTATAAATCTGACACCTTTTTTTTTGTGGGTGTGTGTGAAATTGATTTGCAATCAAGCTAAATTTATTGGTGATTTGATTTTTGAAATATTA TGCTTTTTGATAAGCTGATTCATTCAATTTTTGTGTGTGTTAAATAATCTTACGTCTAGGAACATGTTCATAGTTTGTGCAATACAGTGTGGTTATTATA GTTGCTGAGGTGAGTCTAATCTGGTAATATTTTCCAATTGATTGATATGGCTTTCACGCCTATGATATCGATGAAATTATCCGCCCGTGGAATCATTCTA TGACAGGAATATGGAATTTAGCATATTGTTACTGTATTTTTAAGGTGAATGGTGCAAACCGTTAAGCTCTTGGAAAACTAGAATTTCACCGGTTCCGGGC TCTTGAATTTAACTCTTTCCCTATCATCAAAAGTAGTAGCACTCATTTATTTGATGACATGTCTTAGTTTTAGAGGCATGGTAGTTGCTATTCATTTATT TATGCATCTATACTCAGGGATGCATTTGTATAATCATGTTTGTTCTTAACCTGTTGACAATTAATCCATCATCACGAGGCACATGAGTTGAAATTTAATG CACAAGTCCTGTTAACTTTTCTCACTTGGGCAACCATTTGGGGCATTCACTTGGGTTCTCATAGAATGAATGATACAGAAAGTGATATACTCAAATTCTG TTTTTAGATGGAAGAACATCCATCTGAACTTCGGGTAGATTCAGCAACAGATTTTGATGATGGGATTCAGAATGTCACTGAGGAATCATCTTTATTGTGT ACAGAAACTAGAATTAGTGTCAGTCCCCATGCTGAAACTTCAACCTCATCTGATACTAGAACCGAGTTGTACGGGAATATTACTGTTGACGGTTCTTCCA GAAATGTTGCTGCGAGTAATCAGATGATGCGTTTGTCTGAATTTGAGGAGCTAGTCCCACCTTATCAGGTAAGTGCTGGTCATAGTCGTCATGTGTCATA TAGGGATAGTAGCAACACAGCTAGTACTTCATCTGTAGGACAGTCTTCAGATCCAGTATCTGTAAATGTTTCTACTAACAAGGATGCAATCAATAATGTT GATGATCTAGTGGTTAATGGCGTTTCTCAAATCTCTAGTGAGACAATGCATCCCAGGAGGTTAACCCCTCAAGAGCATGGAAATTCGAGTTCTGGTGAAT ATCCTGTTCAGAATCAGACTAGTGCATTCATAGCTATCCATAGTTCTTCTTCTGACCCTGTTGCTCAAGCTTCCAACTTACGAGGAAATTCTCAGTCATT AGAAGAAGAACCACGTAGGGAGACGATACCTTCAGGTTTAGGTATTCTTGTGTCCAACCGGGAAAGAGGGCAAGGAAGCGATGGTATGCTTCAAGTTGAT GTGGTCACAATATCATCCAACATTTTGTCTGATCGCAATGCTGATGCCAATGGCCATGATGCTAGAAGGAGTGGTAGAAGATTATTTTGGGATGCCTTTT CAAGACGTAGTTCTAGAAGGCTTGGTAATTCTGCAACAATGGTCTTCTCTGCTGGTGGTGCTGACGATCCAGAATCTCAGGATCGATGGCTTGTTGATTT TGGTGGTGATTTCTCAAATGATAGGGTTGGAGGTTCTTCTGGCTATATGGGCAGTAGAATTCACAGATTGAATGAAGGAATGAGGCACTCAAGATCTGAG ATCTGGGAAAGGCTTCGTGGTGGCCTTGATGAAATCAGTCAGTTGAATTCTCCATGTCCGTTAGGACTCCATGCCGATGGCATGTGCTCATGTGACTCTT CCCCAATAGCTGAGGAATCTAGCACCCGAGCAAGTATTTCTAGAATTGTCATGCTAGCAGAGGCTCTGTTTGAGGTTTTAGATGAAATCCATCGGCAACC TGGATCACTTTCCCTATCCATGGCCTCACTCCCTGCGCCAGAATCAATCGTTGACTCTTTCCCTTTGAAGTCTCACAAAAAGGTTGATGCAGCTGATGAT GGCAATGACATTGAACAATGTTACATATGCCTGTCGGAGTACGAAGAGGGGGACCAAATACGAGTTCTTCCTTGCAACCATGAATATCACATGATGTGTG TTGATAAATGGCTTAAAGAAATACATGGTGTATGCCCTCTTTGTCGTGGCAATGTATGTGGAGGATTCCCGGAGTCTGCCACCAACTCAGAATTGCCATC TCATTGATACTGTACACATGAATGTAAATATTCAGATCTTCAAATATATTTGATCCTTGGCAAATGTTACATATGAAATAGACTTCAGAGTTCGATATAC AAAGTAAGATTTCAGATTCGAATTTTGTGATGCTTCTCATTCCTTTTCCCAACTATCTCAGTGGAAAATTAATTAAGCACACAGAGGCATATGCTGGTTA TTCGTATCGACCTGGTTACTTACACAGATTTTTGTCTATGCCATAAGCCATATAACGACCAACCTTGTGGCATTGCCATTATTTGGGTAATTAGGTAGCT GAAATTTGCTTGTCTTCGAATCCACATACATAGTTGTGACACTAACTTTCAGCAGTACCAGGTGTTGGGTGTTGAGGTTATTGAATTGGCATAATTGTAT GAAAATGATTCCCCCAAAACTTTCAGCAGTACCAGGTTGTAAATTTAGTAGGACTTAATAATTTCTGTAGTTTTTTATATCATTAGA
• Tissue: flowers
• Gene name: LI_gene_51377;
• Additional information: details;

Expression of Ll_transcript_112626

FPKM

• FPAB: 0.4
• FPNAB: 0.3
• LF1: 0.2
• LF2: 0.3
• LF3: 0.2
• LF4: 0.2
• UF1: 0.1
• UF2: 0.2
• UF3: 0.2
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_112626

• Blastp: RING-H2 finger protein ATL52 from Arabidopsis with 46.67% of identity
• Blastx: E3 ubiquitin-protein ligase RLIM from Homo with 39.44% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT5G17600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453130.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;