| Id Trinity | FTRINITY_DN55439_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_109979 |
| Sequence | ATATATTATTTTGCGGAAGAAAATATTCTTCATTAACTTCTTCATAATAATGATGGTACAAGCATAACACAACACTTAGATGCAGCAAGTGATGCTGTTC TAATATAAGCCACTCGTGCTTCAACCCATCGATCACAGCCGTCCATTTTCATCTCCAAGTGAAAGTGCAGGTCTTTCCCTCTCTCTCTCTCTCACACATT CATATTAGATCGAACCACTTGCACCTAAGCCACACCTTCAAGGACAACCTCTCACGCGCCACTCACGCGCCACTCACGCGCCACTCCTCAGGCAATACCA ACTTTAACAAGCTCCAAGGTGGTTTCATCTTTTCTTCATTTCGTGTTTTCTTTTTCTCTCTCTCTCCACCACTAAATTGCCTCTTTTATTTTTATTATCT TACTTTATTAATAAAAAAGTTATTTTTTTTTTTGTTTTTCGTAAGTTCGGTTGTTGTTTAGTGACCATGATGTAATAAGTTAGATTCTGCGTAGGAGCTT CGTGTACTGGGTCACCCTTTTTTTATAAGCTAGTAAACACAAAACCTTTGTTGATATAACACTTTAACATGACTTAAAGGTCAATTTGTTATGAACCTGT TCAATTTGAGTTAGATTGAAGAAATTCACTACGGCTTTTGCTTGTTATTTTGGTCAACGTTGTTTACTAGATCTGGGGTCGTTCATTTTAGGTATGAAAT TTGGGTTTTCTTTTCTAATTGGTGCTGATTTTCATTTCTGAATGTTCAATTTTATCAGCATGAACTTGTTTTTGTGGAATTATATTGCTGATGAAGTTGG GGTTTTCAACCACATTTTGTTGATTTTTATTTCTGAATGTTCAATTTTATTAATAAAAAGTGATTTTGTAGAATTTCAACCTGGGTTTCTTTGATTTGTG TTAAAATTTTGACCTTTATTGAAAACGAATTGAAAACTGCTTCTTTTTTTGGTATACCCTAATTTGTGTTATTTGAAATTTGGGATAAACTAAGCTTCTT GAGATGGGGGATGAGACTTCCGATGCAATGAACCTTGATTTGAATCTGGGTCCAGGTCCGGAGCCACCAGCTGGGTCCATGATGAATGAAGCTATGAACT TGGATGATTGGATTATTGAGGAGCCTCTTCATAGATTTAGTGAAGGTTTGAGGCTTAGGGCACGACAACGATGGAGATGGCGGCATCATCTTCCTATCCC TCCTCCTCCTGCAGTTCATGTTCATATTCCGGAAGTGCCACAGCATTTGCATTTTCATATACCGCCAGAAGCTCGGAATATCTCTATGGAATTGGACCAG TTGTTGGTCAACTCTGGTAATGGAAGTCTCTTACAGGCTGGTGAAGGCAGTGTGGCTGCTGAGGAGAGAATGGAGGTGGAGAAGCCCAAAGCATGTGAAA ACAACAATGGTATTATGGAGGACGAGACAGCAGCAAAGAAGGAAGATGTTGAAAAGGGTAGTGGCAATGACGGGGATTTTTTCGATTGTAACATATGTAT GGACCTGGCCAAAGATCCTGTTGTGACTTGCTGTGGTCATTTGTTTTGTTGGCCATGCCTATATCGATGGCTGCATTTACATTCCGATGCTAAGGAATGT CCAGTTTGCAAGGGAGAGGTGACTCTGAAGAATGTTACCCCGATTTATGGTCGTGGAAACAACGTTCGAGTTCCTGAGGAGGACGCCACTCTTAAAATCC CTCTCAGGCCCCATGCTAGGCGTGTTGAGAGTTTGAGACAAATCCTTCAGAGAACTGCACTCACATACCCCGTCGAAGAGATGATTCGACGTCTTGGAAG CAGAATTGATCTTACTCGGGATTTTGTTCAGGCAGGTGAAACGCTTGAGAGAACCAGCTCCTTGCTAAGTAGGTTTTTGACATCTCGAGGTATCCGGAGA GAGCAGAACGCCGGGGCACCCCCGGATGATGTGGTGGGTTTGACTCAGAATAATCCTCTTGAGGCAGGGGATAGTCGAAGGCTCCATTCCGTTTCACTTC GAAGAACACAATCAAATAGAGCAAGATTCACATCAGCACTGAGTAGTTCTGCTGAAAGGTTAGTGGATGCATACTTCAGTAGCCAGCCATTTGGTAGAAA CAATGAACAACCTCCACCAGTTGATGACAGAGATTCCTTTTCAAGTATCGGTGCTGTCATAAATTCAGAGAGTCAAGTGGACACTGCTGTAGAAATTGAT TCCATGGTATCCTTATCAACTTCTTCCTCTAGAAGGAGAAATGATACTTCAAGAGTTTCTGATGTGGACAGTGGAGATTCTCGTGCTACAAGGCGTAGAC GTTTGAACTGATAGAGAAGTCCTCTAGATCGAGTTATTACTATTCTGTCATGTAACACATATGATAATAATTTTCCAACACCTATGTAAGTGCTTCTTGC TTTGGTATGGCCTTATATTTATGAAGTATTCACCTTTTACAAGTTTTGGTAGATTTAAGATGTTTTGCCATTTTGAAAGTAACTTTTGCAATGGAATACC ATGCTACTTAAGTTTTATTGCTAGAAATCCTTCATGGAAATAGAAACTATCTATAATGAATCGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51415; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_109979
| Blastp | E3 ubiquitin-protein ligase RMA3 from Arabidopsis with 44.09% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RMA3 from Arabidopsis with 40.17% of identity |
| Eggnog | Ring finger protein(ENOG4111IHV) |
| Kegg | Link to kegg annotations (AT4G27470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419619.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |