Id Trinity | FTRINITY_DN55441_c2_g2_i3 |
---|---|
Name Transcript | Ll_transcript_111896 |
Sequence | GTTTCATTCATGTCTTGTTCCACTTGTCTTGTTTTGTTCCCTCCTAACTACTTTTTTCTTCTAATAAAAAATTTACTTAAACAAAATTACTATATTCCCA TTTTCCAGCAAAGCAAATAGTGAGCTTTAATTTACCTTTCTCTTTTTCCAAAATCCACTCTATAAATCAACTAATCTTGCCCTTATTCCACAGCATAGTA GAAAAAGAAAGGAAAGGGTAAGAGAAGAAAGAAAGAAAGAAAGAAAGAATGGAGAACAAGGAAGAAGATGTGAAAGTTGGAGCAAGTAAATTCACAGAGA GACAAGCATTGGGAACAGCAGCTCAGGGTGACAAGGACTACAAGGAAGCACCACCAGCACCATTGTTTGAACCAGGGGAACTCAAATCTTGGTCTTTCTA TAGAGCTGGGATTGCTGAGTTTGTAGCCACTTTCTTGTTCCTTTACATAACTGTTTTAACTGTCATGGGTGTCAATAGATCACCCTCTAAGTGTTCCTCT GTTGGCATTCAAGGCATTGCTTGGGCTTTTGGTGGTATGATATTTGCCCTTGTTTACTGCACTGCTGGAATATCAGGTACCCCTTTCACTCTTTTCTTTC ATCTTTCTTTTTTATATGCTTTTATATTCTTTATAGTTTCAATAAGCTTATTAGGCTTTATTTAACATTGTATGTTATTTTATCTTTCAATATTAGTAAG TTGAGCTTATAAAAATAAGTGCTTTTAGATTATCACACAGAATAAATCATCACTGATTGATAGTGTCATCGGTTGGTTCCTTTCAAGTTTCAATTTTTAG ATGCTTTTTAAACTCATAACACTGTGAGTCTTCTCTTTATTTCAACAAGTTACCAGCTTTCAAAAAAATGGAAGTAATTTGGTCATTAATTAAGTAATTG AAGATTTACCTTTTTTTTATAGTTTATTTCAAGATCTAACCATCACTTTATATTTCTCCAAGAGTTGAAGTCTTGAAAGGTTTGTGAATTATTTGGATAT AAAAAAAAAGAATGAATCGAGGATTTAGTCTTTATTTCAAATTAAAGTATTTTTCCTTTGAACTAACGAATTCAGAGGTTGGTGTTTGTTGGTATAGGTG GACACATAAACCCTGCAGTGACCTTTGGTCTATTTTTGGCAAGGAAGCTTTCCCTGACAAGAGCACTATTCTACATTGTGATGCAGTGTCTTGGAGCTAT CTGTGGTGCTGGTGTGGTGAAGGGCTTTCAGGGTAATGCTAGGTATGAGTTGTTCAAAGGTGGTGCTAACTTTGTGAACCCTGGATACACCAAAGGGGAT GGCCTTGGAGCTGAAATTGTTGGCACTTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATGCCAAGAGAAATGCTAGAGACTCTCATGTTCCTCTGT TGGCTCCTCTTCCTATTGGGTTTGCTGTGTTCTTGGTTCACTTGGCCACCATTCCAATAACTGGCACTGGCATTAACCCAGCTAGGAGTCTTGGTGCTGC TATTATCTTCAACAGAGACCTTGCATGGGATGATCATTGGATTTTCTGGGTTGGACCCTTCATTGGAGCTGCTCTTGCTGCTGTATATCACCAGATAGTC ATCAGAGTAATTCCTTTTAAGACAAGGGCTTGATCCATTCTTCATCCATCGTGTCCATATGTTCTTGTATTTCTATTTATCAATTATTATTGTGTGTGTA AATTATTATTATGGCATAGTCCTCTTGTTTGTGATCACTTATGGTTTTGGATAGAGATTTCTTTCATGC BLAST |
Tissue | flowers |
Gene name | LI_gene_51446; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_111896
Blastp | Probable aquaporin PIP1-2 from Oryza sativa with 87.33% of identity |
---|---|
Blastx | Probable aquaporin PIP1-2 from Oryza sativa with 88.76% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (9270874) |
CantataDB | Link to cantataDB annotations (CNT0000345) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444664.1) |
Pfam | Major intrinsic protein (PF00230.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |