| Id Trinity | FTRINITY_DN55442_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_111814 |
| Sequence | GAAACGGCATAAGATATTTTATTTTCCTTCTTCTATTAATAAAACAAATTGGCATTTCAAATTGGGTTTTTGCATTGTCCTTGAGAGCATTCTTGGTGTG TGCGGCGCGGCGCGATTTCGTTCGGTAGAAATTCAGCGGCGATGTCAGGGAAAGAAGAGAATCGAATATTCGTGGGAGGTTTATCTTCCGACGTTTCCGA GCGTCAGCTCCACCGTGCTTTCGATCGTTACGGCAAGATCCTTGAATGTCAGATAATGGTTGAAAGAGATACAGGCCGTCCACGTGGATTTGGGTTTATT ACATTTGCTGACCGTAGGGGAATGGAGGATGCAATGAAGGAAATGCATGGACGGGAGCTCGGTGATCGTGCCATCTCTGTCAATAAGGCCCAGCCAAAAA TGGGATCTGATGATGCTGACCATGGTTACAGAAGTAGCTATTCATCTGGTGGCAGGGGAAGCTATAGGGTGGGAGACAGGACAGGACAGGATGACTGCTT CAAATGTGGGCGTCCCGGGCACTGGGCTCGAGACTGCCCTATGTCAGGTGGTGGCCGGGGTGGTGGCGGCTTATTTTCTTCACGTCCTAGGTTTGGAGCT TCCGGTGGCCTTGGGGATCACCTAAGCAATGAACGTGATCGCTATGCTGATGATCGTTATGATGGAAGACGTTACGGAGATGGGGATCGTTATGATGATC GTTATGGCAGCCATGACCGCCATACCAGTGACAGGTAAACCAGGTTTCTGGTTGTTATTAACCAAATTACTGCTCTGGTTCTCATTTTGCCCTAGTTTTA AAATATCAATCAAGAGTTTCCTTTGAAAAAGTCGACATTTTGTTTCTTTCTTTTTTGCCTTTTTAAGTGGCATTTACAAAAGCCATTATTGCATTCACAT TTGATTAGGTGACCTGATCTGATATTCCATTAAGGGCGCGTCTAGCCGTCTAGGTATACAGCCTAACTAAGCACACTCGATAAGGTATTTTGAAATAAGT TAAAAAGAACTTATTTCTATAAGCTTCTTTGTTAACCTTATTGAAATTAAGCTAAAAAGAGATTACAAAATGATTATAAGTTATTTTCATAAGTTATTCT TGTAAACACAATAAAAACTCCTCCATATGTTGCTAAGTAACATGTATTCTTTTCTTTTTTAGGATAAAATGAAGCAGCAATCTAAATTTTGGTTACCCCA AGAGTTTTATGTATTTGTTACTCTAATGATTTAAAATTAAACTGTTAAGGTATCCAACAAATGGTGATCGTTTTGGAAGTGGTAGAAATGGCGGTTCTGA TCGTTACCCGCAAAATGGTCAAGGCAAAGATAGAAGCTACGACCGGCTAGGTGGTCCACGTGGAGGTGCTGCCGATAGATATGGCGGTGGAATGCCAGCA AGAGATGAAAGAAGGACCTACAGGAGCAGCAGGCCAGGTCCATATGACCGCCCCAGTCGGGGTGCTCGCCCATCTTCATTTGATCGGTACTGATTTGTTC CCTTTATTGAATTTTATGGGATATCCAGATGCAGAAGGCCCACTATGGACCTAAATTCCTTTTTGGATGATATATGGACCTAGTTTTCTCTACGTAGGGC ATGGAAGTTTCATTGAACAAGTAGATATTAGTTTCATAGATTATGGATTGGTTTGTTTATGTCTTTAATCTGAGCTTGCAAATCTCTGTTGAGTTAATTT CTATTTGGATTGATGGAGAGAATTTATTAATGTTATTGATGTTCCTCTGGGTAGCTTAAATTACCTCCCTAATATGCAGTGCAAAAAGTTAATTGCTTTT TTAAAAATAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51450; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_111814
| Blastp | Glycine-rich RNA-binding protein RZ1C from Arabidopsis with 54.38% of identity |
|---|---|
| Blastx | Glycine-rich RNA-binding protein RZ1B from Arabidopsis with 64.12% of identity |
| Eggnog | Rna-binding protein(COG0724) |
| Kegg | Link to kegg annotations (AT5G04280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461493.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |