| Id Trinity | FTRINITY_DN55460_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_112317 |
| Sequence | TCTTACATTATTTTCATCAATCTTTTTGACTTTGGAAGGTTACTTGGACGTTTTTTGCACGTATTTATTCACTGTTACTGATATAGATAGACACCCTCTA GAACTATCATTATTCTTGCTTTTATACTAGCTAGTTTTATGTAGTTTGTGTAGGACTCCATCATGAACAAGTGTCTGTTGTGGCTTCTGGAATCTAATTT CTAATGAAAACAGAACAGACTCTTGGTGCTTGTGTTCATGGCATAATAAGTAAAGAACATACATACATTCAGTTAAAGATTGAGACAACAGTATTCCTTT TCAATGGCTTCAAGTCTAATTCCTTTCCTTCTTGTCTTCCTCTCTCTCCAATCTCAACCTTTCGCGGATTCTTCTTCTTGGGTGAAAGCTGGTTATTACT ATTCCGGCAGTGAAATTTCTGCTTCAGACATTAAAGCCAATTTGTTCACTCACCTCTTATGTGCTTTTGCTTTCATTAACTCCACAAACTACAACCTCTT TATCAACTCTACTCACAAGTTCTCAAACTTCACCAACTCAGTAAAGCTTCAAAACCCTTCTATTTCAACTCTTGTATCCATATGGAGTGGCAGAGAAAAG TCTTCAGTTTTTTCCTCTATGCTAAACCAATCTTCTTCTAGAAAATCCTTCATCGATTCTTCAATTACAACAGCAAGGTTATATGGTTTTCATGGCATAG ACCTTTATGGAGCATGGCCAAGGGAGGGTACAGAACTTGTTAATTTTGGAAACCTTCTGAAGGAGTGGAGGGCTGCAATAACTTCTGAGGCAAGAAACTC TAGCAAGCCAGAGTTAATATTAGTGATGGCAGGTTACTACCTTAAAGCCTCAGACTCATTGAGCTACCCTTTTGATTTAATGCAAAGAAACTTGGATTGG GTGCATTTTGTGGCATATGATGACTATGTTCCTAGTAAGGATAATGTTACAGGTTTTCATGCTGCTTTATATGGTCCACCTACATGGGATAACACTGACT CTGGTATCAAGGAGTGGAGGAAAAGGGGGTTTTCTTCTAGCAAGCTCGTAATTGGGTTGCCTTATCATGGATATGCATGGACACCTGTGAACCCGGGAAG CAGTGGTGTTGGAGCTGAAGCTTCAGGACCTGCTATTACAAAGGATGGTTCTATGGCTTATAAGTTAATAAAGAGTTATATTAGAAGCTTTGGGGATGGA GTTGTTTCACATTATAACGATACTTTTGTGGTGAACCAGTTCAAAGTTGCATCCATCACTTGGGTTAATTTTGATGATGTTGGGACAATTAAGGCCAAAG TTTCTTATGCAAGGAAAAATGGACTACTTGGTTACAACGTTTTCCAAGTGGGAAATGATGATAATTGGGTCCTATAAAGAGCAGCTCAAGAAGTAGTTGA AGATCATCAAAAGAGGAGGTTGTTGATAATTGTTCTGCTAACAACTCTGACTGTCATACTTCTATTAGGGATATTATTTTGCTACTACCATAGAGGAACC AGAGCTAATATTACCAGAATATTGTATAAGCTAGGGAGATATTTATCAGCACCTGAAAAAGATTTCGAAGGAAATGACTCTGATTTGATAGCATTTAGTT ATCTCACAATTACAGTCGCAACAGATAACTTCTCAGAAGATAATAAGCTTGGAGAGGGTGGATTTGGCATTGTGTACAAGGGGAAATTACGGAAGGGACA TGAAATAGCAGTAAAGAGGCTCTCAAAAACTTCAAACCAAGGCCTTGAAGAGTTCAAAAATGAGATCACACTTACAGCAAAGCTACAACATGTGAATTTA GTTAGACTTCTGGGGTACTGCTCAAAAAAGGATGAGAAGATGTTGATCTATGAATACCTGCCAAACAAAAGCTTAGATCAGTTCCTCTTTGATCCTAGGA AATCGGTTCTCTTAGATTGGAAAAAGCGTGTCAATATCATTGAAGGGGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATCATCCA CCGAGATCTTAAAGCTAGTAACGTTTTATTAGATCGTGAGATGAATCCCAAGATATCAGATTTTGGTATGGCTAGAATATTCAGGAAATATGAGCTTGAA GCGAACACAAGCAGGATCTTTGGAACATACGGATATGTACCACCTGAGTATGTCAGGAAAGGCATATATTCAACCAAGTATGATGTTTATAGTTTTGGAG TTCTTCTCTTGCAAATCATAAGCAGAAAGAGGACTTCATGTTACTACGGCACACACGAAAATTTGAACCTTTTGGAATATGCATATGAACTGTGGAGGGA AGGAAGAGGCGTAGAATTTTTAGACCCGTTATTGGATGATACAACATTGCCTTTTAAAATCATGAGACGCATGCAGATAGCTCTTTTGTGTGTTCAAGAG AACTCTGCAGATAGACCTTCCATGTTAGAATTTGATTCAATGTTCAAGAATGATGGTGCAGTTATTAGTACTCCAAAAGTGCCAGGGTTTTCAATTAAAA AGAAGGAACATGAGGAAGAAACATCTTACTCCGGGATCAAATATTCTTCAATCAATGATGTTACAGTTTCTCAACTGGCACCAAGGTGATGGATGGCATG GACTGTGGAGAAGTCATGTAGGTCGATTCGGCTTTGTTCCTTACATAGCAGAAGACTCTGGCTTGGAAATAAAGAGTGAAAACTGAACCTTGCAGCTGAG GCTCTACAGTTTGTGACTTGTACTTCATAATCCTAGCAGGCGTGGGTTACTTATGTGCACTACTTTTATTATTAGCAGCAATGTTATTTGTGTAAAAACT TACTCTAAATCCCCACCATTTGTTCCATTATGATCTAATGGGGCTAGTTCATTAGGGAAGATCATGCAGAGGGTTCTCAAATCAGAAAATAAACATAAGT TAGGGATAAATAAGAAGTTTATGTTCTATAATTAAGTTTCTAAAATTTAATCAAGACATAAGTTAGGCAACATTTAGGAACTCCAGACTATCAAGTGTTT GACCAATATTTAATTTTTAATTTAATGCAAATTACAATGGATTGTTCGATCCATTGTCACAGTAGAATTCATTTAGCAAGCTGACTTGAGTGATAGGTCA TTCTCAACTCGAGGCACGTTGTAATCCAAGTAATGGAAAAAAAATTGTTGGGATGACTTGGTTGCTGGCTTGTGTCAATAAATGTTTCCCAAGCATACAA TAATTTTCAATCACCGTCTAAAGTGTTAGAAGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51590; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_112317
| Blastp | Chitotriosidase-1 from Mus with 29.66% of identity |
|---|---|
| Blastx | Cysteine-rich receptor-like protein kinase 10 from Arabidopsis with 51.15% of identity |
| Eggnog | chitinase(COG3325) |
| Kegg | Link to kegg annotations (71884) |
| CantataDB | Link to cantataDB annotations (CNT0000159) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020236074.1) |
| Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |