Id Trinity | FTRINITY_DN55470_c1_g1_i1 |
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Name Transcript | Ll_transcript_112579 |
Sequence | CTAAATTCACACACATTTCTCTCTCTTTCTTCTTCGTAGTGTTTCTCGAATTTTCCATTTTCTTCAGTGATGAGCGAAATCCACCCACATCAACATTCCA TTATCGCCGATCCAGAACCCGATTCTCCGGTCACCGAACTCCAATCTACGCTTTCTCCAAATGCCAATTTTCTCGATTCAGAGACCCAAGATTCTAGGGT TACGGTTTCTTCAGAGGTAAATTTTGAACTTTCAGATCAAAATACTGTTGATCGATTCGATGATTTAAACAATAGAATTGAGAAGTTTCCAGGTTCTGAT ACCAAATCGAAATCGTTGTTATCGGAATTCGATGATTATGTTGCTGGAAAGAGAGATAGTGATTTAGGTCATGGTTTTGAAGTTGGTGATATGGTTTGGG GAAAGGTGAAATCTCATCCATGGTGGCCTGGGCATATATATAATGAAGCATTTGTGTCGCCGTCGGTGCGTAGAACTAAGAGGGAAGGGAATTTATTGGT GGCATTTTTTGGAGATAGTAGTTATGGGTGGTTTGAACCGGGTGAGTTAATCCATTTCGATCTGAATTTTGCTGAGAAGTCGCAGCAGACGAATTCGAGG ACTTTCTTGAAGGCTTTGGAGGAGGCGGTTGATGAAGCGAGTCGAAGGAGTGGTCTTGGATTGGTGTGTAAATGCGGGAATACTGATAATTTTCGTCAGA CAGATGTTAAAGGGTACTTAGCTGTAGATGTGCCGGAGTATGAGCCTGGAGGGTTTTATTCGAATAATGAAATTAGGAAGGCGAGGAGTAGCTTCAGGCC GAGTGAGGCTCTTGCTTTTGCAAAGCAGTTGGCATTGTCTCCACAAGACGGCGACCATGGAAGCATTGGGTATATTAAGAATAAGGCTATGGCTTTTGCG TATCGAAAGGCAGTGTTTGAGCAACATGATGAGACTTATGCACAGGCTTTTGGGTTGCAGCCATCACGATCTCAGAATAATACAAATAAACAGCCTGCTA AGCAGCCTTCTAGAGCTCCTCTGAGTGGTCCAATGGTGACGGGTGAAGCCTTGGGTAGTGGGAAGAACACTACTAAACCTCTTAAAGTTAAGGACAGTAT GAAAAAAGATAAATATCTTTTTAAGCGCCGTGATGATCCAAGCAACTCTTTCCAGATAGCATACAAGGAGGAAACACCTAATGCAACTGGGCATGATGTA CTTCAAAAGGGGGCTCCCGCTGTGCCTGTGGTGCCTCATAATTTAGAGAAGCATGAAGATACAGGGGTTACAAGTCATGATGTTGTGACTTCAACTTCAG ATGCCAAAGCAACTTTAATAGATGATGAGACTCAACCAGATGGCAGTGGCCTTGCATCCAAAGCCGTTTCCTCTGATGTAGAGCCTCATCTTGTTATGGG GAAGGAATCTCCTGCTGAAATGACCCATAGTTTAGAACTGGATGATGTTTCAAGTAAAAGCTTGGGTAAGTCCGATGTGTCTGGGGTGGTGCCATTGCTC AGCATAATTGATCAGAATGCAAAACAGTCTGGACCAGATGTTGCTAATGGGGGAAATGACTTGCATCAAGCTAAGCATCATGAAATTGCTTTAGTGAAGA AAACTAAAGGTCATAAGCGACCTGCAGATGACTTGAACTCTAAAACTTCTGCTACTGGGGAGAGAAAGAAAAAAAAGAAAAAAGATTTAAATTTACAACC TGCGTCAGGACATCTGGAGAAGCATTCTCCTTCTGGAAAATCTGTACACCTGTCAGGAAAACCTGTGTCAACTGCAATGGCTCCTAGACAGGATTTTCGA ACAGAACAAGTGCAAGGAGATTTTGCTGCCCATAATTTGCCACCAATGGATACCATAGGAGATGCTAGTTTTGAATTGCCGCAACTTTTGGATGATTTGC AAGCTCTTGCTTTGGATCCTTTTCATGATGTTGAAAGGAAGATCCCTGCAGTTGTTCTGAAGTTCTTTTTGCACTTCAGATCTGTTGTTTACCAAAAAAG CTTGTCTACAACACCACCGACAGAGAATGAAGATCATGTAGCTCTTGGTGCTAAATCTCCTTTGACTGTCAAGGCATCTGACAGTCCTGGCCATCATGTC AGAGCTACACCGGTTGTAAAACCTGCAAAACACTTCGTTCGGCCTGATGATCCTACAAAAGCTGGACGGAAAAGGGCACCCTCTGATCGTCAAGAAGAAA TTGCTGCAAAGAGGTTGAACAAGATAACAGATTTAAAGGCACTAGCGGCAGAGAAGGCTGCAGCCAGTCAGAAAACTTCTGAAGCCCGGAGAGGAGAGGA AAAAGAATCCATTTCCCAGGCTGCACCCAAGTTAGTGAAACCAGATTCGAACAGGAAAGTGCAGCGTCCAGCTAAGGTAGTTGAGCCCACCATGCTGGTG ATCAAGTTTCCTCCCCAGACATCACTTCCATCTGTAGCAGAGCTGAAGGCAAGGTTTGTTCGCTTTGGCCCAATGGATCAATCCGGTTTCCGCGTGTTTT GGAAGTCCTCTACGTGCCGTGTTGTTTTCTTGTATAGGGCTGATGCACTGTCTGCATATAAATATTCTGTAGCAAGCCCATCCTTATTTGGCAATGCGGG TGTGAGGTACTTCCTCCGGGAATCTGAGGATTCTACACCTGAAGTCGCTGTAGCTGCCAAGGCTAGGGAAGACACCAGTGCTGCCAATGACACACAGCGG CTCAAGGATCCTGCAGCAGCTCATCACCCGACATCAGTACCATCACGGCAACCTCTTCCACAGCCAACAGCCCAGCTCAAATCCTGCCTGAAGAAATCTA CCGGCGACGAGTCTGGTCAGTCAATAGTTAACGGAAGTAGTAATAAAGGAAACCCACGTGTAAAATTCATGTTAGGTGGAGAAGAAAGTAGTAGTAAGGT GGAGCCATTAATAATGGGTAATAGAAACATCAACAGTGCTAGTTTTGCTGGTGGTGGAGCACCTCCTATTGCAATGGATTTTAATAGTAAGAATGTTGTT CATTTGGTATCTTCTCAACCTCCATTGTTGCCTACACCCCCTGCTACTACACTCTTAAGTAAAACCACACAACATAATTTGCATAATTCCGAATTCGCAA TGGCACCCAGAAACACTCCCAATTTTATAAACACCACTACAAAAGCTACTTCTACTACAAAAGCTACTACTACTACAAAAGCTACTACTACTACAAAAGC TACTACTTCAACCACAGTTGATATATCACAGCAGATGATAAGCCTTTTAATGAGATGCAATGATGTTGTGAATAACCTTTCTGGGTTATTAGGCTATGTG CCTTACCATCAACTTTGACAAAAAAAAATGGCACCAAATCCATCCAAATACATCAAGTTTCACCCTTTTTGGATTGTGAATGAATTGCTCAAAAGAATGC AAGAGATACAATCATGGAAGAGGAGGAAAAGTGGGGTTCATACATAAATGTTGAAGTTGAGTTTTAACTGTGGTTCTTGGGCTCCAAAACTAAGTGCATT CTCATGTCCAATGATGTCATCTTCTTAGTTACATTACCTTTTATTTTTTGTTTTCTAGACTTGTTTTTTTTTAATATTTTAAATTACATTCAAGGTTGTG TAGTTGTTGATATATCAAACACTAAAGGCACATTATATGCTCTAGTGTGCTACACCTTTGTAAGCTTGTGCCATTGTATGAGATTATACTAGAATTGCCT TTTTATTGTTTCTTGTATTGCATGTATTTCCCTCACTTAGCAAGTGTTATTTGGAATTTGCTATTGGTAATTCCAATTATCTTTTTTTCTATTGATGAAC TTTGTAACATATTTAACAGTTATAGAGTATTATGTCGTCATTGAATCCATGTTATCGTAGTGATATAAATGTTTGGC BLAST |
Tissue | flowers |
Gene name | LI_gene_51674; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_112579
Blastp | Histone-lysine N-methyltransferase NSD3 from Homo with 34.74% of identity |
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Blastx | Histone-lysine N-methyltransferase NSD3 from Homo with 34.38% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (54904) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418956.1) |
Pfam | PWWP domain (PF00855.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |