Ll_transcript_111959

• Id Trinity: FTRINITY_DN55475_c1_g3_i4
• Name Transcript: Ll_transcript_111959
• Sequence: CACTAGGTATGTCTCCAAATCCATAGCAAAAAATTAGTACCTATGAAGATATATAGATCGAAATCTTTTCCATTCATGCTTCTTCATTAATGTTATAAAA TACAATACATTCTGACACACATGTAATGTTTCTAATAGCTGTCAATCCTAATGTTAAAAAAAGAACAACATTCTTGTCCTTTAAATATGCAAATAACAAC TATCTCTCAATATATTTTCATTCCAATGGCTCTCTCTTCTATCACATTCATCTTATTCTTGGTGTTGTTTCTTTGCATGTGTCTTCCATTTGATGCTGAT GCTAGTACTTATGATAATACAGTGAGATCAGAGTTCCTTAAAGTTACTCCTTCTCAATTTGTTGGCTCTGTGAATGAAGTTGTTGATGTTTTGCAAGATG TTACTTCTATTCTCTCTGAGGTTGGCAATGTTTTTGGAGATTTTAGGCTTTCAAATGCAGTTTCTGATTGTCTTGATTTGCTTGATTTGTCTTCTGATGA GCTTAGTTGGTCTGTCTCAGCTACTCAGAGTCCCAAAGGCATGCATAATAGCACTGGGAAGCTAAGTTCAGATTTAAGGACATGGCTAAGTGCTTCACTA ACAAATCCAGAAACATGCATGGATGGATTTGAAGGCACAAACAACATTGTTAAGGGTCTAGTATCAAATGGCCTAGTCCAAGTTATATCATTGGTGCAAC AACTTTTAACCCAAGTGAACCCTGTTATGGATAATTTCCCTTTCACAAATAAGGGTAAATTCCCTGGATGGGTTAAACCAAGGGATAGAAAAAAGTTACT TCAACAAAATGAGGTTGTTGTTGTGGATGCTATAGTAGCTGCTGATGGAAGTGGAAATTATACTAAGGTTATGGATGCAGTGAAAAAAGCACCTAACTAT AGTATGAGAAGGTTTGTTATATATGTGAAGAGAGGTGTTTATAATGAGAATGTTGAGATTAAGAAGAAGAAATGGAATGTTATGATTATTGGAGATGGCA TGAATGAAACTGTGATAAGTGGAAACAGAAGTTTTGTTGATGGTTGGACAACATTTAAATCTGCTACCTTTGCTGTTAGTGGCAGAGGATTCATAGCAAG AGACATTTCATTCATGAACACTGCAGGGCCAGAAAAGCATCAAGCAGTAGCATTAAGATCAGATTCAGATCTTTCTGTGTTCTATAGATGTGGCATTTTT GGTTACCAAGATAGTCTCTATGCTCACACAATGCGCCAATTCTATAGAGAATGCAAAATCACTGGCACAGTTGATTTCATATTTGGTGATGCCACTGCTC TATTTCAGAATTGCCAAATACTTGCAAAGAAAGGGTTGCCAAATCAAAAGAACACAATCACAGCTCATGGTAGAAAAGACCCTGGTGAACCGACCGGTTT CTCGATCCAATTCTGTAACATATCAGCAGATTCTGACCTTCTTCCAGTTGTTAATTCCACTCATACGTACCTCGGTAGGCCGTGGAAGTCGTATGCGCGA ACAGTTTTCATGCAATCGTATATAACCGATGTGTTACGGCCCGAAGGGTGGTTAGAGTGGAATGGCGAATTCGCTTTGGATACATTGTATTATGCAGAGT ACATGAATTATGGTCCGGGATCTGGACTAGGTGACCGCGTAAAATGGCCCGGATACCATGTAATGAATGATACTAGGCAAGCTAGTAACTTCACTGCAAC ACAATTTATTGATGGGAACCTATGGTTACCTTCTACTGGTGTAACATTTATTGCAGGATTGGGAGTTTAAAACATTGCCAAATCTTAGGTTGTCCTTGTT GTTGTTCAGAACAAAGAAGAGGGTTACTATAATGAATGGTTTTTGTTATTTCATTAATGTGTAGCTTTGTACTTGCATGTTCTATAATTCCTTATTCTTG GTCCCTAAGTTTGGTGTTTCTCATTTTGGATAAAAATTTATTAGTGTAGCATTGCAATGCACAATATATATGTGGACTACTTTGTGAAATGTAATTTTAG TAACTATTAGTGCAATAATTATGTCTTGTAAGTTTTGGTCCTATCTTTTATTTTGATTCGTAGGGTACCTACCTTAAATGTTGATGGATGAAATCCCACA ACAACTTTGTCACATGTCTAAGTGTAATGACATGGTGCATAAACATTTCTTGTTTCCACCACATGCAACTTGGGAC
• Tissue: flowers
• Gene name: LI_gene_51729;
• Additional information: details;

Expression of Ll_transcript_111959

FPKM

• FPAB: 6.3
• FPNAB: 10.7
• LF1: 0.9
• LF2: 2.9
• LF3: 4
• LF4: 2.8
• UF1: 0.6
• UF2: 2
• UF3: 3.8
• UF4: 4.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_111959

• Blastp: Pectinesterase/pectinesterase inhibitor PPE8B from Prunus with 69.58% of identity
• Blastx: Pectinesterase/pectinesterase inhibitor PPE8B from Prunus with 70.36% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417375.1)
• Pfam: Plant invertase/pectin methylesterase inhibitor (PF04043.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;