Ll_transcript_111055

• Id Trinity: FTRINITY_DN55489_c0_g1_i8
• Name Transcript: Ll_transcript_111055
• Sequence: ATAGTAATAGAGCACTAGACAAGGATTTTGAAAGAGAAAACCCTAAGCAGAGAGAGAGAGAGAAACATCAATGGCGGAACATCTAGCATCTATCTTCGGC ACTGAGAAAGACAGAGTTAACTGTCCCTTCTACTTCAAAATCGGAGCTTGTAGACATGGTGATCGTTGTTCAAGACTCCACACCAAACCCACCATTAGTC CTACAATCCTTCTCTCTAACATGTACCAAAGGCCTGATATGAACATCAACATCAATTTCAATGGTTCTGATCCTAATCAACCTCCACCACCTGAACCTCC TCAGTCTCAATCTCAGTCTCAATCTTCTCTTGACCCTGATAAGGTGCAGGATCACTTTGAGGATTTTTATCAAGATCTCTTTCAGGAGCTTAGTAAGTAT GGTCAGATTCAGAGCTTGAATATTTGTGACAATTTGGCTGATCATATGGTTGGCAATGTGTATGTTCAGTTTAAAGAGGAAGACCATGCTGCCAATGCTC TTATGAATCTCACTGGAAGATTTTACTCAGGTCAACCAATCATTGTTGATTTCTCTCCTGTTACCGATTTTCGAGAAGCTACTTGTAGGCAATATGAGGA AAATGTCTGTAATCGAGGTGGCTACTGCAACTTTATGCACCTAAAGAAGATCAGCAGGGATTTGAGGAAGCGATTATTTGGAAGAAGCAGGCGTTTTCAT GACCGCAGTGGAAGCAGAAGTCAAAGCCCTCCACGGAATCGTAAACATGAGGAGCGTTCACATTCTGGTCGTAGTTCTGATAGAAGAGATTATGACAGAC ATCATGACAACCACAGTGGTCGGGGCAGGTTGCCTAGAAGCCGTAGTCCTCAACGGAGAGGAAGACGAAGTAGGAGTCCAGCAGGAAGGGATAGTAGGTC AGTCAGAGAAAGTAGTGCAGAAAGGAGAGCTAAAATAGAGCAATGGAACAGGGAGAAGGAACTGGCAGACTCTGGTAACAAGAACAGTAGCAATGGCAAT GATTATGAAGAACGAGATGATGCACAAAATGGGAGTGAATCTGGTAGACACTAGAATGAGCAGATATAGTTTCTATTGTCACTAGTGACCAAAAAGAAGA AAGACCCTGTACTGTGGCAAGTGATTTGGTTTGTCTAGTTTAAACCTACTAAGTTGGTTTTTAGCTGCTAGCATCTTATTGTCTTATTCTGAACTTCTGT TGTTTAGTTATACAACATTGTAGTATTTATACCAAGAACAGTTTAACTTTGCGGCTTCAAATGATATATTCCTCCACCATGAAAAGGGAGAAAATAGATC GAGGGGTAGAGAGGAGGAGAAGAAGTGCAGTAAAGTTCCGAAAAAAGTTGATCTTTTTGTGGGGTCAGTGATTAAGTGGAAGAAAGTTCGGTTTTGGTTT GGGTGTTTTACATCTTATAATCAAAGTAGAAGGGATTCAATGGAAAAGATTGGAAATGGTGCATGTATCTGGATTCTAGACTAGGTATGTGCATATATTT CAGCTGGAGAGTTTTATGATACCTCTATTCTTATCTGTTGAACTTCTACGAAGTTCGTTTTATTGATAGCTGGTTTATTATTCAATGAATTTTTATTCAA AATCCAATGTTTGAATACACGGGGTTGCATCAACTACTAATAGCTGGATTATCTGTGCTATTATGTGTAAAATGCTTTTTGGTCTTCTTTATTGGCTTGA GTTTTGGATGAATCATCCAACTAAATATGCATTTTGAGACCTCAAATTTGGCATGCTGTAGCTTTCAAAGTAATGTTAATAGCCTAGAATCACATGGGTA GACTTATAGTCAGTTTGTAAGTTGGTTTTGGAGAGGAAGTAAAAGAAGGG
• Tissue: flowers
• Gene name: LI_gene_51850;
• Additional information: details;

Expression of Ll_transcript_111055

FPKM

• FPAB: 9.8
• FPNAB: 16.1
• LF1: 12.7
• LF2: 11.1
• LF3: 11.9
• LF4: 13.4
• UF1: 12.7
• UF2: 12.7
• UF3: 12.7
• UF4: 11.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_111055

• Blastp: Splicing factor U2af small subunit B from Arabidopsis with 62.75% of identity
• Blastx: Splicing factor U2af small subunit A from Oryza sativa with 68.3% of identity
• Eggnog: auxiliary factor(ENOG410Z5PX)
• Kegg: Link to kegg annotations (AT5G42820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428850.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;