Ll_transcript_110331

• Id Trinity: FTRINITY_DN55492_c4_g4_i11
• Name Transcript: Ll_transcript_110331
• Sequence: ATAATTCAGTCTTTACCTTTTCATGATATTTCAGAATGGTATTTTTTGTTTCACTGTATTATTTTCCAACCAGAAATATTTCTAAGATTTATTCTTTGAA ATTACAGTTAGTATCTATGGGAAAGAGAAACATTCAACCTTAAAGTTGCCTATTAAAACAGATCAAGACACTCTAAGAGAAGGATACAGATTTATACGCT CTGAGGAAGATGACATGGATCCGTCATGGGAACAAAGGCTGGTGAAGCGTTATTATGATAAGCTTTTTAAGGAGTATCCTTTCCAAAAAAATATTTTTTT TCAGTAGAATTATTTATGGGGTGCTGCCAGTGCTGGTTTCCTCTTCTTTTTTAATTATGTGATATGGGTATTGAATTATAAATTTTGGTTAATAGAACGA CTGTGTATAATGTGCATGTAAATATGTAATAGCTAATGCAACACAGTCAGTGTTGGTTTTACTAGATTTTGCATTCCATTATCCAAGTCCGCCCCTCCTC CATAAGGTATCCCATCTAAAAATTTTATATGAAACAAAATAAGAAGTGATTATTGAAATTGCTTTGGTTCATGTTTAATTAGGCATCACAGTGGTGGAGT TTGAGTGCCTAGCTGTAAACATCGCACTTAAACTCTACATTCTTTCACAACTTTTTGGGTTTTTTCCCTCCCGGGAGTTGAGTGAGGCTGTAATCTCTCT TCTAATAGCAATAAGACTAAGTACATACTTCTATTATATATGTGATCTATCATTCCGGACAATCCTATCATTATTGTCCCATGCAATGAATGCTTGTTTT GCTTATGATACACTTCTTTATCTCTTTGATTTATTTGCCAATGTTCTCCTGCCTGATTAGGCATCTCATACACTGAAGTTTGTGAATAGTGTATCTGATA AATCTTGGTTGATTTAATTTATGCACATTGACCATGAAAGTAGTTGTAGCCCTTAATGTTTTGATCACAGGTTTGTTATTGGAAGAAAAGAAAGTTATTT ATGTGTTTTAATGTGGTTCACCAGAAGAACTTTATTAGCCAAAGAAGCCACTAATTTTGCTCTGCTATTGAATTTAGTTGTACCAGTTGGCTTGTTACCT TAAATCATTTTAAGATACTGTATTGCTGACATGTCACAGTACAAGAGTGGCAAGATTGGTCTCAGGTGGAGGGCAGAGAAGGAAGTCAGATCTGGCAAGG GGCAGTTCATATGTGGTAACAAGCATTGCGATGAGAAAACTGGATTAGCAAGCTATGAGGTGAACTTTTCTTACATTGAAGCTGGACAAAACAAACAAGC CCTAGTTAAACTGGTAACATGTGAGAGATGTGCACAGAAACTTAATTACAAGAGGCAGAAAGAGAAGGAGCAATTAGAAAAAAAAGAACAGGAAGATGAT AGAAGAAAGAGGAGCCGGTCAAAGAGTGATGATGATACAGATGAGTTGCAAGAAAGCAAGAGGAGGAGGAAAGGGAAAAGGGCCTCTGTTTCAGCCAGCG ATCATAAAATTGATGGCGATGATGATAATTTTGATGAGTTTCTGGTGGAGATGTTTCCCTGATCTTAGCCTGAAAAGCGCCTTATGACACCAAAGTAAGC AGGACTTCAGCACTTAAAATACAGGAATCACGTGGCTATGAATGCTTTGGACAATAATAGTTCCAAGAAATTTCTATGGTGCCCAAGGTGAGTTGTCAGC TTTATGCTGCCTTCATAATGAATGTTTGACAACTCAACGTAAGTGCCATTTCCTAGAAGAAAAAAGTTCAGTATTATATATAGCATTTCCCTCATTTCCT TTCCTGTAAAACCCTAAGATTATTGTGCATTGTAAATGTATAATATGGTAGGTGAGTTTGTGTTCTGTACAGCAAGAGAATTGCAAAGTGGAAGGACCAG CTTCATTGGCTCTGGACTCATGTGTCGACACCAGAAGATAGTTTTCTATAGATTACACATGAAATTTTTTTATTCTCGTTTGTCCACTATTGTTAAGGTT TTAATTCCTTTTTCCTGTAGTGAATGTCTTTTTTTAAGGATATGATAGAGAAAAAGCACCAGCCTCTGCGGCAAGGCTTACAATGGGTGGAACCTGAGTA CTACAAAAACCATTAGGATAGTGACTAAACAAACTAGCTAACCTGAGTACTACAGGCTCGCTTGTTGCAATGGGGAGTTTGATGAGTTAACATGATAGGG AAGAGCTATCATAGTATGAATGTATGATAATGTAAGGTTTTCCCTTCACTCACCTCAACACCACAGTTGCAGCTGTCTGTCACTAACACATCAATGTTAT TATCTGGTGTGTACTAAATACTAGATATAGTAAGAGTTTATCATGCCCAATCATATTTTATCCTATTTTGGCCACCAAATGAATCCTAAGTTTACAAGTC TTTTTATTTATTTGTTTTTCAATTTATTCATTATCTTTCCAAGTGTTATTTAACCCATATGTTAATTAGAGTTTCTAACCATCTTTCCCAAGTTGGAGTC CTTAAATAACACTCATATTCTCTAAGGGTTAGTTTGGGAGTTAGATT
• Tissue: flowers
• Gene name: LI_gene_51889;
• Additional information: details;

Expression of Ll_transcript_110331

FPKM

• FPAB: 3.3
• FPNAB: 2.9
• LF1: 3.4
• LF2: 2.7
• LF3: 2.7
• LF4: 2.9
• UF1: 2.8
• UF2: 2.6
• UF3: 2.3
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_110331

• Blastp: Protein FRA10AC1 from Homo with 59.74% of identity
• Blastx: Protein FRA10AC1 from Homo with 65.38% of identity
• Eggnog: Fragile site, folic acid type, rare, fra(10)(Q23.3) or fra(10)(Q24.2) candidate 1(ENOG410YN91)
• Kegg: Link to kegg annotations (118924)
• CantataDB: Link to cantataDB annotations (CNT0000357)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449594.1)
• Pfam: Folate-sensitive fragile site protein Fra10Ac1 (PF09725.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;