| Id Trinity | FTRINITY_DN55492_c4_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_110303 |
| Sequence | GAAGTGAAGAACATAGAAAAAACCCTTCCTTCTAACAATTACTCTTTTTCTGTTCAGATAGAAGAGAAGAAATCAGGCATGGCATCGTTTGGGTCTCTGA AATCCGCCATTTTCGAAAGAGAAGAGAGAAAACAGCAGTACCAGGCACATATTCGAGGCCTCAATGCATACGATCGCCACAAAAAATTCATCAATGATTA CGTTAGTATCTATGGGAAAGAGAAACATTCAACCTTAAAGTTGCCTATTAAAACAGATCAAGACACTCTAAGAGAAGGATACAGATTTATACGCTCTGAG GAAGATGACATGGATCCGTCATGGGAACAAAGGCTGGTGAAGCGTTATTATGATAAGCTTTTTAAGGAATACTGTATTGCTGACATGTCACAGTACAAGA GTGGCAAGATTGGTCTCAGGTGGAGGGCAGAGAAGGAAGTCAGATCTGGCAAGGGTATGAGTTTTACTTTCACAGGATAGTTTCACTTAGTAATGATTCC CCTGCTCCCTTCCTTTGTTTCAATATTACTATTTTAAAAAATAGGTTCCTTCTAGTTTTTCTTCTTTATGTAGGCTTCATTTAACTTTTATACTAAAGAG CTCTGCCTTATAACCAAACAAACAAATGTCTGATTTAAAGTTAAATTTGAATTCCCCTAGCCCCTATTTATATATTCCCAACATTTGTTTTCATGCCACT GAATCTAATCATTTGATAAACTACGCCTTTGAATATCAAATTGTTATGTAACTGGTCCTTGTACAAATATGTTCGTCTGTCAAAAAGGTGGCACTTGGAT ATTTTGTTTTAATGAAATGATGTTCTATCAATGATATTACTTTCTTCCAGGACTTGCTGGTTGTGTTTCCTCATATTTGTTTCTTTACAGAAGTAATTTC ATTGAAGAGAATAGAGAAGTTCTACTGGGGAAGAAGAACATGTTGCCCCTTCATTATTTCGTCTTTAATGGGATTTTCAACTAACAAGCTGGTCTCCTCC TTCTTTCCCCACACCTGAAGTCCTGAACATGGAAATCCCTCCCATGGGTTTCTCTCTTTCTTGGGACACTTTCATTTGACAAAAAAAAGCCAGAGATCTT AGATGGGAACTAGCCAACCAGGTTTGGACTAGGGTAAATCCCAACACATGAAGCTTGAGAGCTACCACCTTTACTAACTCCCGAGTGAGAGGTCATTTTG TAACATAACATCCATGGCTACACAGAAAGAACCTGACTATCTATCTTAAAACCCAGAAATACGCTCTCAGCCAAGTTAACCTTGAAATCAGAGATAGCCA GTAGAAAGAACCTTAAGAAGTGCATCACTATCCTCTTCTAAGAGGAGAATTATATTATCAGCACATTGATTAGGATTATATGACATTTTATAAACTAACT TTTATAACCTAATATGACTCCCTTCCTCAAGGTCTACGTCATTTGTGTGTGGGTGGGTGTGGGACAAGCTTTAGCACAAAAAACGTTCCTTATTCCACCA GTAGCCACTGTGTCTGGAGTCTTGAATTTGCATCCCCATATTTTACCCATTTGAGGTTAGATATTTGTTTCCCATTGATTTCCTCCCAAAGTAACAACTT TTCTCATTCTTCATTGTCTCCTACCCTTTGTTCCAAAGAAATGGCCTCTCTCGATTCTAATTTGTGTGGACAGTCAAATTCTCATAGAATATTTATGAAC CCCCAGAACCTTAGTTCCATCATACCGTTCGATGGAGACAAAAGAGCTGGTTTATAAGGACCTTGCAGTCATGGGACTGACATTGAAAAACTCAAGATGG GCTGCAAAAGGATTAGACGTCCTCTCATGCTATGGTTCCCTGCGGTCCGAAGATGGTGCTGCATTAGGTTAGGGAGCTGGGCTAACTCCCCAGCTACCTA GCTACCAGATTACTGCTCCTAACTCATCAGTGACATCTTCCCTGATCTATATATTCCTTTCCCGTTGGCCAGTCTTTCAATGTCCCATTTGGGTCACAAC CCTCTTTCCTTATTTATTCGAGCAGTTTTGAAATTCTTTATAATGATTCACGTAGATTCTGCTTAGTTGCTTACATAAGCTGTGGTCCTTTGCTTGTCCT ATTCCTTTTGCATTGTTGTAGAAGTAGTTTTTTAGCTTGTTATTATTATTTGAATATATCATTGGTTAGAATCCTATGCAGTTTTAGAATTAATTGGTTA ATAACTTTACAGGGCAGTTCATATGTGGTAACAAGCATTGCGATGAGAAAACTGGATTAGCAAGCTATGAGGTGAACTTTTCTTACATTGAAGCTGGACA AAACAAACAAGCCCTAGTTAAACTGGTAACATGTGAGAGGTGAGTCGATATGAGACAGTGCTGGTTGTTACTTTTGTCATTGTTTTCTTCACACTAGAAA CTCACCTGTACCTTTTAATTTGAAGTTCAATAATTTCCTCCTGAATGTTGCTTCCTAATCATATTTGCTAAATGTTTGTTCTGCTTCTTGCTATTGCTAT GCACTTTGTCTTACTTTTTAAGCTTAAACACATTTACCTCATGCAACCCAGTGAAATTTTATTACTTTGAAGAGTCCTGCTTTGGTATTTGATAGTTTCA TGGAACTTTAATTGCATCTCTTGGGAAATGTCAGTACCAATAGCCCTTTGAAATACATGACCTTTATTAGCCTGTCTGCGTTGCTTTGTCTCATGATATG TTTTAACTTTTAAGTTGGATCATCTGATCACGATTGAGAGTTTTCAAAAGTGATTGCTGGTTTGTGATGTTGTTGAAGGTCTTTCTAATTAACTTCCTGG CTTCTAAAGTTACCTTCAAGCATTAACGCCAGTGGTATGTCAATTCTATGGGATTCAATACATAATCAGCTTTAGGATTGACTCTCGTAACAAAATTGTT TCGAAGCTTACTGCTGTAATTGCCGAAGTAATTCTCTTCAAAATTTTGAATTTTACTATTGCTAAACATACCCTGGCTTATAGGATGTAGCAACGTGCAT TTGTGGCGTACCTTCTTTTGACATGTTTTCATTTGAAGCTTACTTTGTAGATTTGTTTCGAATAATTTTTTTCTAGGGGCATTATGTGTCTGACACACTA CTTACTATCAATGCAAGTCTTACTAGAAATTTAAATCTATGATATATTTTTTATTTTTCCATATTATGGGCGGAAGTGTCTCATTTATAGACACTAGCTG TTTTGCTTGACATTTTTTCATCAAAGGTTTTCTGTTTCATTTTTTGTTCTCGGTTATATTTGAATAGATGTGCACAGAAACTTAATTACAAGAGGCAGAA AGAGAAGGAGCAATTAGAAAAAAAAGAACAGGAAGATGATAGAAGAAAGAGGAGCCGGTCAAAGAGTGATGATGATACAGATGAGTTGCAAGAAAGCAAG AGGAGGAGGAAAGGGAAAAGGGCCTCTGTTTCAGCCAGCGATCATAAAATTGATGGCGATGATGATAATTTTGATGAGTTTCTGGTGGAGATGTTTCCCT GATCTTAGCCTGAAAAGCGCCTTATGACACCAAAGTAAGCAGGACTTCAGCACTTAAAATACAGGAATCACGTGGCTATGAATGCTTTGGACAATAATAG TTCCAAGAAATTTCTATGGTGCCCAAGGTGAGTTGTCAGCTTTATGCTGCCTTCATAATGAATGTTTGACAACTCAACGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51889; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_110303
| Blastp | Protein FRA10AC1 from Homo with 48.92% of identity |
|---|---|
| Blastx | Protein FRA10AC1 from Homo with 48.92% of identity |
| Eggnog | Fragile site, folic acid type, rare, fra(10)(Q23.3) or fra(10)(Q24.2) candidate 1(ENOG410YN91) |
| Kegg | Link to kegg annotations (118924) |
| CantataDB | Link to cantataDB annotations (CNT0000357) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449595.1) |
| Pfam | Folate-sensitive fragile site protein Fra10Ac1 (PF09725.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |