| Id Trinity | FTRINITY_DN55492_c4_g4_i6 |
|---|---|
| Name Transcript | Ll_transcript_110310 |
| Sequence | GAAGTGAAGAACATAGAAAAAACCCTTCCTTCTAACAATTACTCTTTTTCTGTTCAGATAGAAGAGAAGAAATCAGGCATGGCATCGTTTGGGTCTCTGA AATCCGCCATTTTCGAAAGAGAAGAGAGAAAACAGCAGTACCAGGCACATATTCGAGGCCTCAATGCATACGATCGCCACAAAAAATTCATCAATGATTA CGTTAGTATCTATGGGAAAGAGAAACATTCAACCTTAAAGTTGCCTATTAAAACAGATCAAGACACTCTAAGAGAAGGATACAGATTTATACGCTCTGAG GAAGATGACATGGATCCGTCATGGGAACAAAGGCTGGTGAAGCGTTATTATGATAAGCTTTTTAAGGAATACTGTATTGCTGACATGTCACAGTACAAGA GTGGCAAGATTGGTCTCAGGTGGAGGGCAGAGAAGGAAGTCAGATCTGGCAAGGAAGTAATTTCATTGAAGAGAATAGAGAAGTTCTACTGGGGAAGAAG AACATGTTGCCCCTTCATTATTTCGTCTTTAATGGGATTTTCAACTAACAAGCTGGTCTCCTCCTTCTTTCCCCACACCTGAAGTCCTGAACATGGAAAT CCCTCCCATGGGTTTCTCTCTTTCTTGGGACACTTTCATTTGACAAAAAAAAGCCAGAGATCTTAGATGGGAACTAGCCAACCAGGTTTGGACTAGGGTA AATCCCAACACATGAAGCTTGAGAGCTACCACCTTTACTAACTCCCGAGTGAGAGGTCATTTTGTAACATAACATCCATGGCTACACAGAAAGAACCTGA CTATCTATCTTAAAACCCAGAAATACGCTCTCAGCCAAGTTAACCTTGAAATCAGAGATAGCCAGTAGAAAGAACCTTAAGAAGTGCATCACTATCCTCT TCTAAGAGGAGAATTATATTATCAGCACATTGATTAGGATTATATGACATTTTATAAACTAACTTTTATAACCTAATATGACTCCCTTCCTCAAGGTCTA CGTCATTTGTGTGTGGGTGGGTGTGGGACAAGCTTTAGCACAAAAAACGTTCCTTATTCCACCAGTAGCCACTGTGTCTGGAGTCTTGAATTTGCATCCC CATATTTTACCCATTTGAGGTTAGATATTTGTTTCCCATTGATTTCCTCCCAAAGTAACAACTTTTCTCATTCTTCATTGTCTCCTACCCTTTGTTCCAA AGAAATGGCCTCTCTCGATTCTAATTTGTGTGGACAGTCAAATTCTCATAGAATATTTATGAACCCCCAGAACCTTAGTTCCATCATACCGTTCGATGGA GACAAAAGAGCTGGTTTATAAGGACCTTGCAGTCATGGGACTGACATTGAAAAACTCAAGATGGGCTGCAAAAGGATTAGACGTCCTCTCATGCTATGGT TCCCTGCGGTCCGAAGATGGTGCTGCATTAGGTTAGGGAGCTGGGCTAACTCCCCAGCTACCTAGCTACCAGATTACTGCTCCTAACTCATCAGTGACAT CTTCCCTGATCTATATATTCCTTTCCCGTTGGCCAGTCTTTCAATGTCCCATTTGGGTCACAACCCTCTTTCCTTATTTATTCGAGCAGTTTTGAAATTC TTTATAATGATTCACGTAGATTCTGCTTAGTTGCTTACATAAGCTGTGGTCCTTTGCTTGTCCTATTCCTTTTGCATTGTTGTAGAAGTAGTTTTTTAGC TTGTTATTATTATTTGAATATATCATTGGTTAGAATCCTATGCAGTTTTAGAATTAATTGGTTAATAACTTTACAGGGCAGTTCATATGTGGTAACAAGC ATTGCGATGAGAAAACTGGATTAGCAAGCTATGAGGTGAACTTTTCTTACATTGAAGCTGGACAAAACAAACAAGCCCTAGTTAAACTGGTAACATGTGA GAGGTGAGTCGATATGAGACAGTGCTGGTTGTTACTTTTGTCATTGTTTTCTTCACACTAGAAACTCACCTGTACCTTTTAATTTGAAGTTCAATAATTT CCTCCTGAATGTTGCTTCCTAATCATATTTGCTAAATGTTTGTTCTGCTTCTTGCTATTGCTATGCACTTTGTCTTACTTTTTAAGCTTAAACACATTTA CCTCATGCAACCCAGTGAAATTTTATTACTTTGAAGAGTCCTGCTTTGGTATTTGATAGTTTCATGGAACTTTAATTGCATCTCTTGGGAAATGTCAGTA CCAATAGCCCTTTGAAATACATGACCTTTATTAGCCTGTCTGCGTTGCTTTGTCTCATGATATGTTTTAACTTTTAAGTTGGATCATCTGATCACGATTG AGAGTTTTCAAAAGTGATTGCTGGTTTGTGATGTTGTTGAAGGTCTTTCTAATTAACTTCCTGGCTTCTAAAGTTACCTTCAAGCATTAACGCCAGTGGT ATGTCAATTCTATGGGATTCAATACATAATCAGCTTTAGGATTGACTCTCGTAACAAAATTGTTTCGAAGCTTACTGCTGTAATTGCCGAAGTAATTCTC TTCAAAATTTTGAATTTTACTATTGCTAAACATACCCTGGCTTATAGGATGTAGCAACGTGCATTTGTGGCGTACCTTCTTTTGACATGTTTTCATTTGA AGCTTACTTTGTAGATTTGTTTCGAATAATTTTTTTCTAGGGGCATTATGTGTCTGACACACTACTTACTATCAATGCAAGTCTTACTAGAAATTTAAAT CTATGATATATTTTTTATTTTTCCATATTATGGGCGGAAGTGTCTCATTTATAGACACTAGCTGTTTTGCTTGACATTTTTTCATCAAAGGTTTTCTGTT TCATTTTTTGTTCTCGGTTATATTTGAATAGATGTGCACAGAAACTTAATTACAAGAGGCAGAAAGAGAAGGAGCAATTAGAAAAAAAAGAACAGGAAGA TGATAGAAGAAAGAGGAGCCGGTCAAAGAGTGATGATGATACAGATGAGTTGCAAGAAAGCAAGAGGAGGAGGAAAGGGAAAAGGGCCTCTGTTTCAGCC AGCGATCATAAAATTGATGGCGATGATGATAATTTTGATGAGTTTCTGGTGGAGATGTTTCCCTGATCTTAGCCTGAAAAGCGCCTTATGACACCAAAGT AAGCAGGACTTCAGCACTTAAAATACAGGAATCACGTGGCTATGAATGCTTTGGACAATAATAGTTCCAAGAAATTTCTATGGTGCCCAAGGTGAGTTGT CAGCTTTATGCTGCCTTCATAATGAATGTTTGACAACTCAACGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51889; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_110310
| Blastp | Protein FRA10AC1 from Homo with 45.39% of identity |
|---|---|
| Blastx | Protein FRA10AC1 from Homo with 45.39% of identity |
| Eggnog | Fragile site, folic acid type, rare, fra(10)(Q23.3) or fra(10)(Q24.2) candidate 1(ENOG410YN91) |
| Kegg | Link to kegg annotations (118924) |
| CantataDB | Link to cantataDB annotations (CNT0000357) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449595.1) |
| Pfam | Folate-sensitive fragile site protein Fra10Ac1 (PF09725.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |