| Id Trinity | FTRINITY_DN55501_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_74830 |
| Sequence | GAATGAGAGAGCAGTGAGCAAAAAAGAAAATGCAGAACAGCTTTGTTCACAAACTGGTCTCACAGACACAGAATCACTTCATTTCTCAGCGAACCATCTT CCATAATCACACTCACACTTTCAGACACCGTGTCTTCACCTCTCTCACCAAACCCAATACTTCACAACAACGCCACCACATTCCTAACTCATTCTTCACT CACCCACTTCACCCTTTTCATTCCCATCACTCTTTTTCCACCACAATTCCTGGGTTTCTCTCCAAACCACTCATTACGCGCCTCAAAACTCTCTTTCATT GCAGCTCCAAGCTACCCACAGTTTTTTTTCGACGTCAGAGCTTTGATTTCAACCAAATTTCTAATTTTTACCAACGCAATTGTTTTATTCGGAATTTCCT CCGATAGTGGTGTTTGAACAAGCCTTGTGATTTCATTTCCTCTGATAGGGGAGAACTTAAAATTTAGTTGAAGGAGGGTTCTATAGTTGGAGTCCTTCTT TTGATTACTAACCCTATATGGTAGTCAGTCAATTCTTGGAGGCAATCCTTATTCAGTTTGACGGTCCAAATTTAGTTTGCTACTCATTGAGAGAAAGCGT CTTTCCATCAATAGAAGCATACAAATAGAAGGCTTTCTGCTGGAGATCATGGATCCACAGGCTAACACCTCATGAAGTGGTCTTGGGCTTGATTGGAGCT AATGTTGCTGTTTTTTTATTATGGAGGATAGCAGATGAAAACTTTATGACAAATAACTTTACTGTGTGTATCCTGATTTATAATCTTCGATCAACTTGAT GATACCACTTGTAGATATTATTTGCTAGACCATTGCTTTGTATGACACTCCCAAGTTCCACTCGTGCTGTGTGTGCATTAAACATTTCTTAGGAAATTCT TCATATTGAGATAGTGTTAGAGCCATAGCAGCATGATATATTACTCCTGTTTTTATTTTTATTTATTATAGAGAAAATACAGGAGTTTTGAAGCTTCAAA TGGTTCCTACTAACCATAATATCCCATTTCAATTTGATGTTTATTTATTGAAGATATCATGCAACACTGAGACCGAATACATACCTGATCAATATGTATT AGCATATATTTTTAGTCAAAATAATAATGATTGCTGGCATGGTACTTACCAGATGTTGAAGGGTGGAATTGAGAAATGCATTGTGTCAATGCTATTTTCT GCATGGATTCAACTTCATATTGAGTCTTGACTACTAATTCAATTCTTTTATGTGGACAGATCTCTTTGGACAATATAGAAAGTGGGCGTTTGCACACCGT GATAACCAATGCATTTAGTCACATAGAGACCGGGCATATAATTTCCAACATGATTGGACTCTACTTCTTTGGAACGAATATCGGAAGAAGTTTTGGAACT GAATTTTTGCTGAAGCTGTATTTTGCTGGGGCAGTTGGCGGTGCCGTTTTTTACTTGGTACATCAAGTCTATAAGGCTCAAACATCAAAGCTGAGCTGGA GGTCAAAGGAATTAGCGTTGGGGGCAAGTGCAGCAGTTAATGCAATTATGTTGCTTGATATATTCCTCTTCCCGAAAGCAACCCTTTATTTCAACTTTAT TATACCAGTTCCTGCTATGTTGCTGGGCATCTATTTGATTGGGAAAGATATGCTGTTGATATTAGAGGGAGATAATCGAATATCAGGAGCTACACATATG GGGGGTGCTGCAATTGCAGCCATAGCTTGGGCAAGAGTTCGGAAAGGAAGGTTCTAAATCCAATTTCATTTCATACATCACAAATTTAAAAAATATTACA AACAATTGCGAGTAATTTGTATGAGTGGAATGTACTATTGGAATTAATTTTCTATGCAATGTTTTTCTCTTTTTGTAGGCATACCTTGACATAATAGTTA GTCAATACAATTATAACATTCATAATGACAAACAACATTTTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_51982; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_74830
| Blastp | RHOMBOID-like protein 12, mitochondrial from Arabidopsis with 67.38% of identity |
|---|---|
| Blastx | RHOMBOID-like protein 12, mitochondrial from Arabidopsis with 68.82% of identity |
| Eggnog | rhomboid family(COG0705) |
| Kegg | Link to kegg annotations (AT1G18600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442150.1) |
| Pfam | Rhomboid family (PF01694.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |