| Id Trinity | FTRINITY_DN55504_c0_g4_i4 |
|---|---|
| Name Transcript | Ll_transcript_76338 |
| Sequence | TTTTGGGTATTGTTTGAATGAAGAAAGGGAGGGACTTAGTTCTGAAAACCCTTCTCAGTTCCAACTTCAAAACTGTTGCCACCATTCACACTAAACGAAA CATGCATTCTGATTCATCGAACCGATATTCCTTCAATCCCTCTCTTCAATGGAACCCCGAAGTTCAACAATACTTCATCAACGCCTATGGCATCCACCAC TTCTCTCGCATCTCCACTTCCTTAACGTAACTCACCACTCTTCCTTTCTTTTACTCTTCCCAAACCCTAATCCCTAATTTTCAATTTCTTACTCTGCAGG CGCCCTTCTCGATACTCATGTATCCGAGTCAATACGCTGAATTCTACAACTCATGCTGTTGTTGAGAAGCTACGTGCACTTATTAATGAATCGTTGTCGT CTTCTGAGGAATTTGAACAATCTGAATTTGAGGCTAATCCATTGAAGGAGTCTTCTCATGATGCTGATGGTTCTGTTTCGAAGTGTCAGATTCCTGGTCT TGATCATGTGCTGTTTGTTTGGGGTTCGGGACCGCATAACATTGAGTATGAGTTTCGGCATGATCAGTCTCCTCCTAAGGAGGTTATTGTTAGTAGGAAG TGTGCTGAGGCTGTTCTTCGTGGCGCTCAGGTATATGTTCCCGGTGTAGTGGCTTGCAGTGCTCATGTAGAGGAAGGTGAAACAGTTGCGGTCTCAGTTG CTGTAGAGCAGCAGGGTTCTGATGGGGGATGGGGTATTGGGATGACACGTGGTACTGTTCTCCAAGGACCTCAGACAGATCCATATCATTTTGAACGGAG TGGCCTTTATATTGGCCAAGGAACAGCCATGTTGTCAAGGGCTGGAATGTTCCGAGTTTCTGAAGGAGTTGGTGTGGATATGAAGAATAGAGTATACAAG CTTCCCTCTTTTCATAAAGTGCTAGAAGGAGAAATATTTCTTCAAAATCTGCCCAGCATTGTTGCTGCTCATGCTTTAGATCCACAAAGGGGTGAGCGAA TACTAGACATGTGTGCTGCACCTGGAGGTAAAACAACTGCAATCGCAATACTTATGAAGGATGAAGGAGAGATCATTGCAACTGATAGATCTCATAACAA GGTGCTAGATATTCAGAAATTAGCAGCTGAAATGGGCTTGACTTGCATAAAGCCACGTAAATTAGATGCTCTTAAATCTGTTTGTCAAATAAATGAATTT GATATGTCTACTGGTCCATGCTGTAGTGATGCCAACAATGGTGTAACAAACCATGTGTCTGGTTCACCAAATTTGCAAGTAGATACAATATCATCCATTG TCACAGAAAGGCCAAAAACTAACACCGTGGAGGAAAATGGTAAAGATGTGAAGGCAGATGACAAAGCTTATGTTAGCAAAGCTGACATCCGGAAGAACAT GCGAAGAATGCGAAATGGACCTGGAAGAAATCAGCGCCTGGTTGCAAAGGTTGATAGTTCAAAAGGTTTTCCTCCTGACAGTTTTGATAGAGTTCTTCTT GACGCTCCCTGTTCTGCTCTTGGTTTAAGGCCTCGGTTGTTTGCTGGAGAGGAAACAGTGGAATCTTTAAGAAAGCATGCCAAATACCAGAGAAAGATGT TTGACCAGGCTGTTCAATTAGCTAGACCAGGTGGAGTTATTGTCTATTCCACTTGTACGATTAATCCTGGCGAGAATGAAGCTTTAGTTCGATATGCTTT GGACAAATACAAATATCTGTCATTGGCACCACAGCACCCAAGAATTGGAGGACCTGGACTTATTGGTCGCTTTGAGTTTCCCGATGGATATGCAGAGGAG TGGTTAAGACCCGGTGAAGAAGACCTTGTTCAGAGATTTGATCCATCATCACCCCTTGATACAATTGGATTTTTCATTGCAAAATTTGCTGTTGGGTCTA AAGATGCCTGAAACATTTTTGTGAGATGGTTAGCCTTGGTTTATGGTGAAAGAAGACAGCGAAATTTTATTTGAATTGGTTTATGGGTATGAGCGTTATA TTTCCATTTTACAATCACAATGGAAGCATAATTTAATGACATTCGAGATATAAGTTGGAGGATACATCAAATAAAGTGTAAGTTATATTTACCATCTTCA AAGGCATGTTTTTCTTTTGGAATTATGTAGCGGTTGGACTATAAACAAGTTTTGAAATGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52008; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76338
| Blastp | Putative methyltransferase NSUN6 from Mus with 47.41% of identity |
|---|---|
| Blastx | Putative methyltransferase NSUN6 from Mus with 39.51% of identity |
| Eggnog | nOP2 Sun(COG0144) |
| Kegg | Link to kegg annotations (74455) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435108.1) |
| Pfam | 16S rRNA methyltransferase RsmB/F (PF01189.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |