Id Trinity | FTRINITY_DN55504_c0_g4_i8 |
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Name Transcript | Ll_transcript_76345 |
Sequence | GTCAAAGATGTCTTAAATGGTCTGCTTTTGACTTTTGAGGATAGTTGATCCCATTGAAGTGATCTTTTTGGAATATAGTTTTCAGGATATATTTTTTTTA CTTTCTTTCTTTATAGATCCATATCATTTTGAACGGAGTGGCCTTTATATTGGCCAAGGAACAGCCATGTTGTCAAGGGCTGGAATGTTCCGAGTTTCTG AAGGAGTTGGTGTGGATATGAAGAATAGAGTATACAAGCTTCCCTCTTTTCATAAAGTGCTAGAAGGAGAAATATTTCTTCAAAATCTGCCCAGCATTGT TGCTGCTCATGCTTTAGATCCACAAAGGGGTGAGCGAATACTAGACATGTGTGCTGCACCTGGAGGTAAAACAACTGCAATCGCAATACTTATGAAGGAT GAAGGAGAGATCATTGCAACTGATAGATCTCATAACAAGGTGCTAGATATTCAGAAATTAGCAGCTGAAATGGGCTTGACTTGCATAAAGCCACGTAAAT TAGATGCTCTTAAATCTGTTTGTCAAATAAATGAATTTGATATGTCTACTGGTCCATGCTGTAGTGATGCCAACAATGGTGTAACAAACCATGTGTCTGG TTCACCAAATTTGCAAGTAGATACAATATCATCCATTGTCACAGAAAGGCCAAAAACTAACACCGTGGAGGAAAATGGTAAAGATGTGAAGGCAGATGAC AAAGCTTATGTTAGCAAAGCTGACATCCGGAAGAACATGCGAAGAATGCGAAATGGACCTGGAAGAAATCAGCGCCTGGTTGCAAAGGTTGATAGTTCAA AAGGTTTTCCTCCTGACAGTTTTGATAGAGTTCTTCTTGACGCTCCCTGTTCTGCTCTTGGTTTAAGGCCTCGGTTGTTTGCTGGAGAGGAAACAGTGGA ATCTTTAAGAAAGCATGCCAAATACCAGAGAAAGATGTTTGACCAGGCTGTTCAATTAGCTAGACCAGGTGGAGTTATTGTCTATTCCACTTGTACGATT AATCCTGGCGAGA BLAST |
Tissue | flowers |
Gene name | LI_gene_52008; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76345
Blastp | Putative methyltransferase NSUN6 from Mus with 53.27% of identity |
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Blastx | Putative methyltransferase NSUN6 from Mus with 47.41% of identity |
Eggnog | nOP2 Sun(COG0144) |
Kegg | Link to kegg annotations (74455) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435108.1) |
Pfam | 16S rRNA methyltransferase RsmB/F (PF01189.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |