Ll_transcript_75811

• Id Trinity: FTRINITY_DN55507_c2_g6_i10
• Name Transcript: Ll_transcript_75811
• Sequence: GACTGAACTCCACCGCACACAAATCAGATAGAAAACGGAAAACCCTATCAACCTATCTCACCCACCACTCTTCTTCTTCTTCTTCTCTCAATTCAATTCC TTCTCTTTCTATATATATATATATATATATATATATATATACCTCTCTTCGTGCATGTCCTTCATTTTCTCTTCTTCAAGGAAGAATAGCACATGGTTTA TTGCCAAAGCACCTACTGCTTCATCTCTCAGTAGAGGATTTGTGGTAGCTCTTCTGATAAGAATGCTACTAAACCGGTTTTTGGAGTCCAGAACTATCCC AATTCCCAACTCATGGAGAAAGTTTGAAGAATCTATGCTTACATTACGAATTGAAGTTTGTGAAGAAGTGCAAAGTTTCCTTTGAGTTGTAATTTCGTTG TTACTGAATCGTCTAAGTAATAAAGTTTTGGCACCAAATCCCTAGTAATTACAAGCCACATCATTTTTCGAATGTCCGAAGCTGCTATGGCAGTTGTGAA ACCTGAGATGAAATCCTACATCTGGCTTAAAACTGCGGATGGTGCTATTCAACAAGTTGACGAAGACGTTGCCATGTTTTGCCCCATGATTTGCCGAGAA GTACTTCAGACAGGCATGGGAGCTTCCAAACTGCATGCTATATCTCTTCCACAACGGGTCAACCCTGCCATATTGGGTTTAATACTTGATTACTGCCGGT TCCACCAAGTACCAGGCCGCTCTAATAAGGAGCACAAAACTTTTGATGAGAAGTTTATTCGGATGGATACAAAGAAGTTATGTGAATTGACATCAGCTGC TGACAGCCTCCAGTTGAAGCCTTTGGTTGATCTAACCAGCCGAGCACTAGCTCGGATTATTGAAGGAAAAACTGCTGAGCAGATTCGTGAAACATTTCAT TTGCCTGATGATCTCACTGAGGAGGAAAAGCTGGAGCCTCTTAGAAACATAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAAAAAGA GGGAAGAATTAAAAGAGAGGAAGAAGCTGAAGAATGTGGAGGTCGAGGAGGATGAGCCTAAGGATGAGCGCTCAGTTGATGATCTTCTTTTATTCATCAA TGGTGCAAATGGTGATATGAAGGGAACTAGAGTGAATAAGAATAAAAAGAAGAACAGGAGAAGGAAAGACCATGCCAAGGATCCTTCTTTACAAAACTCA AATGAAAACGACAGCAAGGAGTTGAGTCCTCTTCCTTCTGCATGTCACCATGACAATTTTGACAGTTCCTTTGTGGCCTCTCCAAGTAAAAACTCAAGGA CGCAAGATCTTCCTGCTGTTAATTTTTCTCCAAAGCTTGAGTTCATTGATGGTGATCTTGATGATGATTTAGATCCTGCAATGAAGGAGGAGCTTGACAG GGAAGTAGAAGATTTTGCACGAAGACTAAATTCAGATTGGGAAGCAAGGATGCAAGAAATTTTATGTGAAGGCCAAGACAGAAGACTAGTACCAATTTCT ACGAGTACCAATGGTTCCACACACTTGCATACAGGTCTTCATCGAAGATAGTGCATCACTGGAAGATAATTTATTTTAAAGGTGACTGGAAGTTGAAGTA ATCTAGAAGGATGACAGCTTAGGGTTTGCTGTTGTCTGAATCATGGAAGCCCAAGTCGTTGTTTGAACACCATGTGAGTAATATTTGTTTGTCCCTTTTA ACTTTGATACAAAAATGTACCTTTGTCTTTTACCTTTGAACATTTTGAATTTTGAGGACCAGGGAAGAGGAGCAAATATAAGGGAAAAGGTAGAAAGTGA GATACGAAAAAAAAATAGGAAATGAACAAACTCTTGGAAAGCCATTTGAGCAAAATCCGCTCATTGGCCTTGACCTTGTTTTCTTGTATTTATCTGGGTC TCAATAACTGTGGCCAGACCTCCTAAAAAATTAAATTAGTTACATTGTCATTTTTGCATTGTTTTGGCTTTTTTAGGTGGTTGAGTTATGGTTGAATTGT ATTATATCTTTCAGAAACTATTTGCCGTTTTTAGCTTATTAAATATGATTATAGTTTAATTGCATGATTTCTTTAGTGGTCTAATTGATTGGTAGAGTGA TGTACTGTTTTATGTTTGGATTGGTCCCAATATAGGGGGTTAGTTACTTATTCCTTCTTGCCCAAGTTCATTTTCTCTCTTAACTTCATATCATTGCATT TCTCCCTTGTTTCATACCGTAGTTGGCCAGCAAGGAAAGAATAGAAATTTTATGTTGCAGATAAGGACTTGACTCCAGTGCATTTGCAACTTTGTGATGC ATTTATAGAATAATGATTTGTGACTAGTTACTTCAACAAAGGATAACTTTTATTGATCCGAATATAGAGTCCAAATTCTTCAAGCTGTACTGACCAAATT CTAGAAATTGGTTTGGATAATAATAATTTGAAAGCTATTTATTAGTCTTGTCGTTTCTTGGCTGTAAAATCTTATATTCTTGTCCATTTATCTGCTCTTT CCTTTCACTCTGCCGTGTTTATGTTTTAACGTGGGGAAATACATGTTTTATAGTAAATGTTCATTATGTTACCTTAAAACTGCTATCTATGTCTGGTACT TTAATACGTGTTTTTTTAATATCACCCCAATTTCCATTTGACATCATGCCATTCAACTCGAAATGTAAAAAGCTCAAAAACGTGTAGTCACAGTGCAGAA TAAACATCATCTGAAACACATTCCGGAAATAGTATTAAAAGGTGCCCCCCTACCCTTCGGTTTAAGGGCTATGAACTTATGATAAGCATTAAATGATATC TAATCAATATTAATTAACTGTGGTTACAAATATTCCTTTTTATTTTCTGTCAAATGTTTCAAATTCACTGTAAATTCGAGGCTTCGAGCTGTTCCATCTG GTTTATTCTGCAATTCCGTAACAACTAATATATTGCTTGATGAGAATTTTCTGAACATGTTTAGATATGCATAGCAAGCAAACTGTATTCATTAATTACC ATGCCACTGATAGTAATAGAAAAAACAGGATTTATTATTTTCATTGTATTGAATTATTGATTAATAATATTTTAATTTGAACTAGTCCAATTGCCCTGCA CATGGAAATTATGTAATATATCCTATTGCAAGTTGTCTAAGCAGAAAAAGGAAGAAAATGTGTTGTAGTTTGATATGTATCTCAATTTAATGCCCCACAG TGGAAGTATTTTATGGA
• Tissue: flowers
• Gene name: LI_gene_52039;
• Additional information: details;

Expression of Ll_transcript_75811

FPKM

• FPAB: 2.8
• FPNAB: 1.8
• LF1: 1.3
• LF2: 0.8
• LF3: 0.7
• LF4: 0
• UF1: 0
• UF2: 1.3
• UF3: 0.9
• UF4: 1.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_75811

• Blastp: SKP1-like protein 21 from Arabidopsis with 64.15% of identity
• Blastx: SKP1-like protein 21 from Arabidopsis with 60.78% of identity
• Eggnog: ubiquitin-dependent protein catabolic process(COG5201)
• Kegg: Link to kegg annotations (AT3G61415)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453187.1)
• Pfam: Skp1 family, tetramerisation domain (PF03931.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;