Ll_transcript_75996

• Id Trinity: FTRINITY_DN55509_c0_g1_i3
• Name Transcript: Ll_transcript_75996
• Sequence: CCTATCCATTTGTTATGATGATGCTTACGTGCTTCACTTAGCCGATTCATAATTCATTCTTCTCCGCCTTCCTACTCAAGAAAATAATATTGAAGTTTTA TTAAACGAAAAAATATAAAACCCTTCTAAAACCCTCCTTAAACCACTTTCCTAGTACTTACCCCCATAAGCATGTGGACCCCAACGCCGGAGACGCTAGC TTCCACTAAAACCGCCCTTTCCGTTGCCGCTTCACTCGCCGCCACCGCGGTTCTCCTCCGATCTACCGTTAACGATCTCATACCTGATACCGTCTACAAC TACTTCAACTCCAACTTTCGCAAATTCTCTAACCGACTCTCCTCTCACCTCACCATCATCATCGAAGAACACGACGGTCTCACCGCCAACCAAATGTTTG ACACCGCCAATGTTTATGTGGGATCCAAACAACAATCTTCAGCGCAAAGAATCAAGGTGCATAAGCCACTCAAAGAAGAGCATTTACAAGTTAACATTGA CAAGAACCAAGAGTTTTATGATTCCTACAAAGGCATAAAACTCAAATGGGTCCTCGTTTCTATGCAAAACAACAACATAAATCTTCATAACAAGCGTGAT AGTCACAACAATGCTTCATTTCATCGAGTTGAAGTGCGTCACTTTGAGTTAACCTTTCACAAGAAGCATAGAGACACGGTTTTGGGTTCTTACTTGCACC ACGTTCTTCACGAGGCTGAGGCAATTAGAGAGGGCAAGAAAACTTTGAAACTTCACACCATTGATTACAATGGCACTGATTATTGGAACTCGATTGTATT AAACCACCCTGCCACATTTGATACTGTGGCCATGGAACCTGAGATGAAAGTGCAACTGTTGGAAGATCTGTGTAAGTTTCTGGATAGGAAAGAGTATTAT AAGAGAGTTGGGAAGTCTTGGAAACGAGGTTACCTTTTGTATGGCCCCCCAGGTACTGGAAAATCAAGCTTGATTGCTGCAATGGCTAACCATCTCAAGT TTGACATATATGACATGGATTTGAGGGAGGTGCAGTGTAATTCGGATCTTAGAAGGTTGCTTATTGGGACGGGAAGCCGATCAATTTTGGTGATTGAGGA CATCGATTGCTCAGTAAAATTGCACAACCGGGAAGTAAATAATAATGGTGAAGATGAAGATAAGGTTACTCTGTCAGGATTGCTAAACTTCATTGATGGA TTGTGGTCAAGCTGTGGAGATGAACGAATCATAATATTTACAACAAATTACAAGGATCGTCTTGATCCGGCATTGTTGAGACCTGGTCGCATGGATATGC ACATTCATATGTCTTATTGCTCTTTCAGTGGTTTCAAGACATTGGCGGCTAACTACCTACGAATTCAGAACCATCCCCTGTTTGAGGACATAGAGGGACT GTTGCACAAGGTTAATGCAACGCCTGCTGAAGTTGCAGGAGAGCTGATGAAAAGTGACAATACAGACAGTGCCATCAAAGGGCTCATCAGCTTCCTTCAA TGCAAGCAGCCAGGCATAACAACACCTTAAAGTAAGGTGTTTTCCTTATTTTTGAGCCAGAGGCAGCACCTTTTCAGTGTTATAGTTAGTATATTGTTTT AAGAATATTTCTTAGGAACAAGAATAGTTTATGTTGGAGATGTGATTGGATTTTAATAAGGGTTCTCTTAACTTTAACTTTAGCCTAAGAACCGAGGACA AGGTATTAAAAGTGATAAAAAGATTATTGACTTATTAAGAGAGAAATGAAAACTTTCCCCAATAGAATTCATTCATATGAACAGGGCATTAATGAGATGT TTATTAGAAATTTATAATTTCTAATTA
• Tissue: flowers
• Gene name: LI_gene_52060;
• Additional information: details;

Expression of Ll_transcript_75996

FPKM

• FPAB: 0.5
• FPNAB: 0.7
• LF1: 1.1
• LF2: 2.9
• LF3: 3
• LF4: 1.4
• UF1: 0.8
• UF2: 2.2
• UF3: 1.8
• UF4: 1.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_75996

• Blastp: AAA-ATPase At3g50940 from Arabidopsis with 51.56% of identity
• Blastx: AAA-ATPase At3g50940 from Arabidopsis with 51.93% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT3G50940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457304.1)
• Pfam: Domain associated at C-terminal with AAA (PF14363.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;