| Id Trinity | FTRINITY_DN55529_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_74643 |
| Sequence | ATCTGCCCCCTTTCTATCTTCTCCTTGATGAAGTGTTTATCAACTTCTATATGCTTGGTCATGTCATGTAGGACTGGGTTGTGTGCAATAGATATTACAG ACTTGTTGTCACAATACAACTTTATTGGAGGAGAATTGTAAACCTTTAATTCCTTTAACAGTTTTCCACCCATATTGCCTCACAAATTCCATGAGCAACT GCTCTAAATTCAGCTTCTGCACTACTCCTTGCAACCACGTTCTGTTTTTTTGCTTCTCCAACTAACCAAGTTTCCTCCAACAAAGGTGCAATAGCCTGAT GTTGATCTTCGGCCTGTCACACTCCCAGCCCAATCTGCATCAGTGTAGGCTTATACCTGAAGGTGTCCATAGTTTTTATAAAGAAGTCCCTTTCCAGGTG ATCCCTTCAAGTATCTTAGGATCCTAAAACCTGCCTCTAAGTGTTCATGACCTGGTGCATGCATAAACTGGCTTACCATGCTTACAACAAATGCTATGTC TGGACGAGTGTGAGATAGGTATATTAGCCTTCCCACTAGCCGCTGATACCTTCCTTTGTCTACCAGATTTTCTGTTGCAGCTTTAAGTTAGGTTCCATAG GTGCTTCTACAACTTTGCATCCAAGTAATCCTGTTTCTTTTAAAAGATCTAGAATATATTTTCGTTGGTTCATAAAGATACCTTCTTTTGATCTTGCAAA TTCAATTCCAAGAAAGTATTTCAATGGACCAAGTTCCTTGATTTCAAAAACTTTAACAAGTTTTTCCCTCAAACTTTTGAGTTCCAAGATATCATCTCCT GTCAAAATAATATCATCAACATATACAATCAAGATAGCAATCCTATTATTTGCTGAATGTTTATAAAACAATGTGTGATCAGCTTGGCTTTGGATATATC CAAGTCTTTTTACCACTGTTCCAAACCTCTCAAACCATGTCATTGGAGATTGCTTCAGCCCATATAATGATTTCTTTAGTTTACACACCTTATTTCTTCC AAGTTCTTCTCCAAAACCGGGGGGAAGACTCATAAATACTTCTTCCTCTAGTTTCTCATTCAAGAAAGCATTTTTTACATCCAATTGATGTAACTGCCAA TTAAAATTTGCAGCAAGAGATAGAAGAATATGAACAGAGTTAAGTTTAGCGACTGGAGCAAATGTTTCATGATAGTCTACTCTGTAAGTTTGAGTAAATT CATTTGCTACCAATCTAGCTTTGTACCTTTCTATACTTCCATCAGCCTTGCACTTAATGGTAAATACCCACTTACACCCCACCTGTTTTTTTACGAGGCG GATCAACAATCTCCCAAGTTCCATTCTTTTTTAGTGCATTCAACTCTTCTAAGACTACTAAACTCCAATCAGGATCATCTGATGCTTCCTCAATGTTTCT AGGCACAAACATATTTGTTACTTTGGAGGTAAAGGCCTTGTGACTTTGGGACAGATTTTGGTAGGAAATATATTGGGAAATGGGATGACTTGTGCTAGGT TTTTTTAATTTTTGGGTGCAGGTTCTGGTTCCTTTCCTAATAGCTATGGGTAGTTCAATATTAGAAGTGGGAATTTCAGTGTTACCTCGAATTTCTCGTG GTATTATTTCTTGGCCTTCTTCCGGGATTGCTAGTTGGTTTGGTGCAGAGATGATGGATTGGTCTTTCATCCTTTTAGGATATTTCCGAGTATAAACACG AAACTCCTCTTTTGATTGTGGTATTTTTTCCCCTGCTCGGGATCCATCTAAGTGTGACATAAGATTTTCTTTAGAAATTTTAGGACTAGTTTCCACATGT TCTTCCTTGTGGTCACTTGTTTTATCAATTAAATATGTATTCTCAGTATGTAAAATAGGAATGTGCAATGGTTCATGCAAATGTAAAAAATTTAAGAAAT TGTCTTTACTCACAATATCATTCTCCCCTGAAGAGAATTTGTTTGAAAAAAAGGTTGATGTTCTAAGAAGGTAACATCCATGCTAACACAAAGCTTCTTC GTAATCGGATTAAAGACTCTGTATCCTTGGGTCTAGTTTAGACCGAGATGCGAAGGGTGTATGCATAAAAACAGTACAACCAAACACTTTTAAAGGCATA TCAGTATGTAATCGACATGTTGGCAAAATGGTTTTGAAAGTGTCCAAAGGTGTGCGATAATTTAACACACTAGTGGGCATTTTGTTGATGAGATAGGCTG TTGTTAGGACATCATCCCCTCAAAAATACTTTGGAACATTACTCTCAAACATAATGGCACGAGCTACTTCGAGGAGATGTTTCTTTTTTCTTTCAGCAAT GTCATTTTGTTGAAGAGTACTTGGACATGTCGATTGATGTTGAATGCTTTTATTTTTGAGAAAATCATTGAGATTCTTATTAAAATATTCAGTTCCATTG TCACTCCTCAAAATGGAGATTTTTGTGTAAATTGAGTTTCTACCATTTGTGAAAAACTTTTAAAAATATTTGGAACTTCAGATTTATCATGCATAAGGTA GATCCAACACAACCGGGTGTCGTCACCAATAAAGGTTACAAACCACCTTTTTCCAAATTGAGTTGTTATTTTTGAAGGATTAAATAAAAAGGTCTAGATG CATGATAAGGTTGAGAGTAATAAGGAGCTCTCTGATTTTTAGCAAAAACACAACTTTCACATTTAAGAGAAGAACAATCAATATTTTTGAATAAATCCGG AAACAAATGCCTGAGATATTGAAAATTTGGGTGCCCTAGTCTGTTATGCCAAAGCATTATTTGGTCTTTAATGGGCGTGGAACTCATACCACTAAGGCCC TGAGATTCTTTATTTTCGAAATTATCCTCAAAGTAATAAAGTCCATCAATCATCTTAGCACTGCCAATCATCTTCCCCGAAATTCGGTCCTGAAAAATAC AATGAGTGTCAAAATATTTTACACTACAATTGGAATCGTAGCAGATTTTGCTAATTGAGAGAAGGTTATAGGAAAGTTTGAGTACATGTAAAACATTTTT TAATTCAATGTTTTTAGATAAGGTAATTTTCCTTTTCCCTGCAATTACAGAAAAACTACTATCTACAATTCTAATTTTTTCATTTCCAGAACTAGGAGAA TAAGTTCTAAATAAACAAGAAAGACGAGTCACACGATCTGAAGCACCTGAATCAATGATCCATGGTTCACACATATTTGAGGTACAGTTAAGGGATGGGT ACTTAAATTACCTGTTTGTGCCACAGAACCACTAGGAGTACCAGATAAAAACATAGAGTTTAACAACCTTATAAGTTCCTCAAATTGTTCCTTTCTCAAG GAGGTCTTTTCTGCCTCATGAGCTGTAGCGAAGGGCTTGTGAAATTTAGGACTGTTGCCCTTTAAATGTGTTGGTTTGCCATGAATTCTCCAGCAATTCT CTCGGGTATGACGTGGTTTATTCCAGTAGTCACACCAAAGATTTGATAAGTTCTTCTGGTTGGTTGAACTCTTAAAGGCAGCAGGTTCTACAACAAGAGC ATTGGTCTCAAGAGGAGGTGGATCAGATTTGATCTTTCCCATCATCACACTTCTGCGGGTTTCCTCTCTTCTGACTTCAGCAAAGACCTCACCTAATGAA GGTAAGGTTTCCCTCCCAATGACCCTGCCACGAACTTCATCTAGCTCCTCATTTAGACCTGTAAGAAATTGAAATATTCTACCTTCTTCCACAGTGTGGA AATATTTTGAAGAGATCAAGGTCCTCCCATACCCTTTTCAAAGAGTGGAAATATTTTGTCACGTTATGACCTCCCTGCCGAATTTCTTTGCCTAGCAAGG TGAGTTCATAAATCTGAGATTTATTTTCAAGATCAGAGTACATTTCCATGACATTATCCCATAGCTCTTTGGCTGTGGAATAACCCATGTAATTGGTGCT AATGTCCTCCTCCATGGAGTTTATCAGCCACGTCATCACCATGGAGTTTTCAACATCCCAAACAGCATACTATGGGTCATCAATGTCTGGCTTGGGTCGC TCACCAGTGAGGTATCCAAGTTTTCCTCTGCCACGTATATACATCTGGACAGATTGGTACCACCGAAAATAGTTCGACCCATTGAGTCGAAAGGTGGTGA TTTGGACAGAATGGGATTCACCGAAAAAAACTCTCTGCTCATGTCTTGGAGGCTGCGAGTCTTTGGTGGCTAAGGAACTGTCAGCCATTACCGCAAATCA GAGGCGCATAGATCTTTGCTCTGATGCCAAATTGAAATATTTGGAATATTATTTATGATTAAAACTGTACAGGGATTCCTTCTTTTTATAGAGGAAAATA CAAAATGTGATTGACTAGAATCAAGAAAGGAAATCCTAAGTTAAGGAGAGAATAAATTACAATAACAAATTACTTAAAATCAATGTTATTAAAACTGTAT CGGTTATCAAACCGGTCAGGGTACTGGTATAGTGGTTTATTGGTTTAACCGACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52224; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_74643
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.34% of identity |
|---|---|
| Blastx | Copia protein from Sophophora with 37.34% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017415205.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |