Id Trinity | FTRINITY_DN55536_c1_g3_i2 |
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Name Transcript | Ll_transcript_74666 |
Sequence | GTAAGAGAGTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCGGTGGAAGTGGAGTGTTGTGGAACAAAGTTTGCATTGTTCATTTTGATAATAGT TGGATTAGTATGCTTTGCAGGATTAATGGCTGGTCTCACTCTTGGTCTCATGTCTTTAGGACTCGTCGACCTCGAAGTTCTCATCAAATCTGGTCCCCCC AAGGATCGAATTCATGCTGGCAAAATTTATCCGGTGGTTAAGAACCAGCATCTTTTGCTTTGCACGCTTTTGATCGGAAACTCCTTGGCTATGGAGACTC TTCCCATTTTTCTTGATGCACTTGTGCCTCCCTGGGCTGCAATTTTGATTTCGGTCACCCTTATCCTCTTGTTTGGAGAGATATTACCGCAAGCGATCTG TACTCGATTTGGATTGACAGTTGGAGCGACACTGGCCCCACTTGTTAAAGTTCTTCTAGTAGTATTCTACCCCATCTCTTATCCAATCAGCAAGGTTCTT GATTGGATGTTGGGAAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAAACTTTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGACT TAACACATGATGAGACAACCATCATAACTGGTGCACTTGAATTGACCGAAAAAACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGA TCTGGATGCTACCCTTAACTTGGACACACTGAATACAATAATGACATTAGGTCATAGTAGAGTTCCAGTTTTTGCAGGAGACCCAAGTAATATAATTGGA CTTGTTCTGGTTAAAAATCTCTTTATGGTTGACTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGC CTCTTTATGATATACTGAATGAATTTCAGAAAGGTCACAGCCATATTGCAGTTGTGTATAAGGATCTAAATGATAAAAAAGACACACCCAAAAGAGTTAA AGATCGAGAACGTTATGACTTTAAGGACAGCTGCAAGAACAAGGGAGAAATGGCGCCCTTGGATAAAAGTAGCGATTTAAATAAAAGTAGAATAATGTTT CATTTTGTTCAATGCATGTTTTTGAAATAAACCATTTTGTTGAGAGCATGATTTTGAAATACCTTGCTGGCTTGCAATTTGTTAATAGTTCCTTTGAAGG GTTCATCATTCCTCCAGTTTGCTGACGTTGCTGAATATATCTGAAACTAATTGTGCCCATAAATTATCTGCTGCATTCAATTTGTGCTTCCTTTTCAAGT TCGTTTTCAGCACACGATTTTCAGTTTTTTACTCCACACACTTGTGGTTTTTTTAGCTATATCTTCGAGGCATACGTATGCCGCAATTGCATTCTATGGT CTTGGTTGATCTACCTAACGAAACCTTTGATGATTATCTTGCTGACCTGACCGTTGCCACAAATATAGGTGTCAAATCCCAGTCAGGTGATACTTTGACT ACTATTGCTAAGGTTGATGGCAGTCCAAAGGTGAAGAAGAGTTCACCAGCTAATCCCGCTCCTGCCTTTAAGAAACGACATAGAGGTTGTTCACATTGCA TCCTCGATGTTGATAATGCTCCCTTGCTCGTTTTTCCACCCAATGAAGTAGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGA GGAGATATTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCCAAGGAGAAGCTTCCTAATGCAATTCCGGTT CAGCCTTCTCCTTTAGCAGTTCAAGGACACACACCAACTAATTCAGTTTCTACAGCTACTTCTCCGACAGGCTCGCCTACGACAGTCGATCAAATCTCGG AAAACGATTCACTCAGGAATCAATAATTCATTCATTAAGAATAAGAGGGTAGCATAGGTTTAAGGCAGATCTGTATATAATTTATTGTAGAAGTTTGGCA TTATGACATTATGTTTATATGCAGAAAGGAACACTTGATATAATAAGAGGATTGTGTCTTTGAACTAGATTCTGCAAGACAACAATTACATTTAGACTAT AACTACAGCTACTTAGCATTAGTGAAGATAAACACTTTCTGAAGATGCACTCTTGTCTTTTAGCATTATAAAATTTTGGGAATCAACATGCTTTTGGAAT GGAATTGTATCAAAATGGTGATTCTAATATTTGTTTTATTTGTCACAACTTTAGCAATGGCAAAATCATGAAGCAGATGTGAAGCACACATAATAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_52278; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_74666
Blastp | DUF21 domain-containing protein At1g47330 from Arabidopsis with 76.39% of identity |
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Blastx | DUF21 domain-containing protein At1g47330 from Arabidopsis with 76.12% of identity |
Eggnog | CBS Domain protein(COG1253) |
Kegg | Link to kegg annotations (AT1G47330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432495.1) |
Pfam | Domain of unknown function DUF21 (PF01595.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |